Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02863 ATGGCTGGTGCTGGTTTCGTTCCTTTCTTGTTAATGGTTCTTGTGCAATTCGTCTATGCTGGGATGAATATTACTTCAAAGCTTGCAATACAATCTGGCATGAATCCTCTTATCCTTGTTGCTTATCGACAACTCTTTGCAACTGTGTCCATTGTTCCCTTTGCTTATTGGCTTGAATGGAATAATCTTCCCAGGATGACAAAGCCTCTTATGTTTCGGATACTATTATCGTCCATGACAGGAGTTACAGGAAATCAGGTTCTATATTTTGTGGGGCTAAAATATTCGACCGCTACAATTGCATGTGCACTGACCAATTTGCTCCCAGCTTTCACTTTTGTCCTTGCAATTCTCTTCAGACAAGAGAATTTGAAAATCAAGAAGAGGTCCGGGCTAGCAAAGGTATTCGGCACAATATTGTGTGTGAGTGGAGCCTTGCTTCTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCAAGTATTCACTGGAAATACGCAGAGAAAATGGAAGCAAATGACTCTTCTGACAGATATCCAGCACCCTACACGAGCACTAGCTTAATGTGTTTACTGGCGAGCTTTCAATGCGTGATCATTGCCTTGTGTTTTGACCACAGTGCCTCGGGTTGGTCATTGCACAATGCTATGAGACTTTCCTCTGCTCTTTATGCGGGAGTGATGTGCACGGCGTTAGCGTATGGCCTCATGTCGTGGACCATTGAGAGAAAGGGTCCTCTTTATGTCTCTGTATATACCCCTTTACAGCTTGTCCTCACTGCCATTTTAAGCTGGGCTTTACTTCGGGAGAAATTATACGCTGGAACTGCCATAGGGTCTCTCTTGATAGTGTTGGGGCTCTATTCTGTTCTTTGGGGAAAGAGGGAAGAGAAGAAAGAGGGTGTTGAAGACTCACTTAAAGAAGCAATGAAGGATAGTGAGAAGGATCCGAAGAATGAAACGGAATTGCAATCCTATGTGCCATCCAATGGTAATCATTGA 1005 0.4328 MAGAGFVPFLLMVLVQFVYAGMNITSKLAIQSGMNPLILVAYRQLFATVSIVPFAYWLEWNNLPRMTKPLMFRILLSSMTGVTGNQVLYFVGLKYSTATIACALTNLLPAFTFVLAILFRQENLKIKKRSGLAKVFGTILCVSGALLLSFYHGKTIGLGQSSIHWKYAEKMEANDSSDRYPAPYTSTSLMCLLASFQCVIIALCFDHSASGWSLHNAMRLSSALYAGVMCTALAYGLMSWTIERKGPLYVSVYTPLQLVLTAILSWALLREKLYAGTAIGSLLIVLGLYSVLWGKREEKKEGVEDSLKEAMKDSEKDPKNETELQSYVPSNGNH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02863 334 PANTHER WAT1-RELATED PROTEIN 7 176 IPR030184 GO:0016021|GO:0022857
Cca03g02863 334 MobiDBLite consensus disorder prediction 303 334 - -
Cca03g02863 334 MobiDBLite consensus disorder prediction 303 322 - -
Cca03g02863 334 Pfam EamA-like transporter family 9 149 IPR000620 GO:0016020|GO:0016021
Cca03g02863 334 Pfam EamA-like transporter family 182 292 IPR000620 GO:0016020|GO:0016021
Cca03g02863 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 191 297 - -
Cca03g02863 334 PANTHER WAT1-RELATED PROTEIN 7 176 - -
Cca03g02863 334 PANTHER WAT1-RELATED PROTEIN 177 318 - -
Cca03g02863 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 151 - -
Cca03g02863 334 PANTHER WAT1-RELATED PROTEIN 177 318 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02863 Cca-Chr3 49942268 49945319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02863 1 333 Nodulin-like Gene Family AT1G09380 52.459 4.48e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02863 - - gmx:100798142 530.02