Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02831 ATGGTTGAAGGTGCAGTTTCTCCAGGGAGCACAAACATGTCCTTCACATCCCTCTCATGTGCATTCCCTGAGAAACAAAACTCAGGGGACACGTTTCTCTCAACTCTGCTTCAATGGTTGGGATTTATCTTCCTCTCACCATGTCCTCAGAGAGCGATATTATCCTTCGTTGATGTCGTGCTCCTCTTGTTTCTCTTGGTGTTTGCTGTCACCAAGCTATGGAAGAGGTTCACCTCCAATGACGCTTCTCACACCCAACTACACAGACCACTCATCAGAAAAAGCCCACCCATTTTCTCAACAACTATAAGGTTTAAGCTTACTTTAACTGCGGCGGTTGTTTTGACTGTACTATACACTGTTGCTTGTGTTTTTGCCTTTAGAACCTCCTCCTCCGAGGTGCAATGGAAGCAAGTTGATGAGGTGTTTTGGTTGGTCCAGGCCATAACACATGCCGTGCTTGCAGTGTTAATCATTCACGAGAAAAGATTTGAAGCAGTTACACACCCTCGATCGGTTCGAGTTTATTGGATTGTCAATTTCTTTGTCATTTTATTCTTTGCCGTTTCTGCTGTTATTCGTTTGGTCTCCGTGGACGTGGATGAAACTAAAGGCTTCAAGGTGGACGATGGGGTCTCTTTTGTTTCACTCCCTCTGTCGTTGTTTCTGTTTTTTGTGGCGGTTAAGGGAGCCACCGGCGTTGTTTTGTCGGAGGAAACAAGACCACTTGTTGACGAGGAAACGAAGTTGTACGAGGGAAAATCCGAGGTTACTGGTTATGCTTCAGCTTCTGTGTTATCCAAGGCATTTTGGATTTGGATAAACCCCTTGTTGCGTAAAGGGTACAAGTCGGCGTTGAAGATTGATGAGATTCCAACGCTTTCTCCTGAGCATAGAGCTGAGAGGATGTCATCTGTTTTTGAATCAAAATGGCCTAAATCAAACGAGAATTCGAAGCATCCGGTTAGAGTCACTTTGCTTCGGTGCTTTTGGAAGGAGTTAGCCTTCACTGCGTTCCTTGCAATTATTAGGATGTGTGTCATGTTTGTGGGACCAGTTCTCATACAAAGTTTCGTTGATTTCACTTCAGGGAAGAGAAGCTCTCCGTATGAAGGATACTACCTCGTCTTGATTCTTCTCGTTGCTAAGTTCATTGAAGTCATGGCAACACATCATTTCAACTTCAATGCTCAGAAGCTTGGGATGCTTATACGGTCCACTCTTATCCCTTCTCTGTATAGAAAGGGGTTAAAGCTATCGTTCTCTGCTCGGCAGGATCATGGGGTTGGGACCATTGTGAATTACATGGCTGTTGATACTCAGCAACTCTCTGACATGATGCTTCAGTTACATGCCATATGGATGATGCCGATTCAAGTTGGTATTGGCTTGGTTATACTTTATAAATGCTTAGGTGCCTCAGTAATCACGGCTTTTTTTGGTCTTGTTTGTGTTTTTGTGTATTCCCTGATTGGTAATCGAAGGAACAACACATTCCAATTCAATGTGATGACGAACCGTGACTCAAGAATGAAGGGTGTGAATGAAATGCTTAATTATATGCGTGTGATCAAGTTTCAGGCCTGGGAGGATCATTTTAACCAGAGAATTTTGGATTTCCGTACCACGGAGTATGGGTGGCTCTCAAAGTTGATGTTCTCAATTAGTAGCACTATTGTTGTGATGTGGAGCACGCCGTTGATGATTTCAACTATCACGTTTGGTACGGCTATGTTGCTTGGAGTTAAACTTGATGCAGCCACGGTCTTCACCGCTACAACTGTGTTCAAGCTGTTGCAGGAGCCTATTAGGACATTCCCACAGTCTATGATATCTCTTTCCCAAGCAATGATATCACTGGAGAGGTTAGATAAGTTCATGTTGAGCAGGGAATTGTTGAATGATTCAGTTGAGAGAGTGGAAGGCTGTGGTGGACAAACAGCAGTGGAAATCATAGATGGGACTTTTAGTTGGGATGACGATAGCTTGCTAAAGGACTTGAAAAATATTAACTTGGAGATCAAAAAGGGGGAGCTCACAGCAATCGTTGGGACTGTAGGGTCTGGAAAGTCATCTCTTCTAGCATCAATTCTTGGAGAGATGCGTAAGGTTTCTGGAAAGGTTCGGGTTAGTGGGAGTGTTGCCTATGTTGCTCAAACATCATGGATTCAGAATGGGACCATTGAAGAAAACATTCTCTTTGGTTTACCGATGAACAGGCAGTGGTACAATGAAGTTATCAAAGTTTGTTGTTTGGAGAGAGATTTGGAACTGATGGATTATGGGGACCAGACAGAAATTGGAGAGCGTGGTATCAACATGAGTGGAGGCCAGAAGCAGCGTATACAACTTGCCAGGGCCGTTTATCAAGACTGTGATATATATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCTCATACTGGCTCTGAAATATTTAAGGAATGTGTGAGGGGAGCTCTAAAAGACAAGACCACTATTCTTGTAACACACCAAGTAGATTTCCTACATAACGTGGATCGCATATTAGTGATGAGGGACGGTGTGATAGTTCAATCAGGGAAGTACAATGATATATTAGATTCTGGAATGGATTTTAAAGCTCTGGTAGTTGCACACGAGACCTCCATGGAACTGGTAGAGCAGGGTGGGGTCATACCTGGTGAAAATTTGAACGTACCAACGAAATCTCCAGAAGCAGCTTCTGAACTCAAGGTAGCCAATGGTGAAAGCAATTCTCTTGATCAACCTGAGTCTAGCAAGAAAAGTTCTAAACTCATCAAAGAAGAGGGGAAAGAAACCGGCAAAGTGAGCTTAGATATCTACAAACTCTACCTCACTGAGGCTTTTGGGTGGTGGGGCGTTACACTAGTATTAGTTCTTTCAATGTTATGGCAAGCATCCTTGATGGCGAGTGATTATTGGCTGGCATATGAAACCTCAGAAGAACGTGCTAAAATATTTAACCCTTCTTTGTTCATGTCCATCTATGCAATTATTGCTGTTGTTTCAATTATTTTGGTATCGGCAAGAACATACTTGTTTACACTCTGGGGGCTAAAGACAGCACAAACTTTATTCACACAAATTCTTCGTAGCATCTTGCATGCACCCATGTCTTTCTTTGACACTACGCCATCCGGGAGAATTCTAAGTAGGGCATCCACTGATCAGACCAATGTTGATGTCCTTCTCCCCTTGTTCACGGGAGTTGTTATGGCTATGTACATTACAGTGCTCAGCATCTTCATCATCACCTGTCAAAATTCTTGGCCAACAGTGTTTTTGATAATTCCTCTTCTTTGGTTGAATATATGGTACCGGGGTTACTATCTTGCATCATCTCGGGAGTTAACTCGCATGGATTCAATTACCAAAGCACCAGTTATTCATTACTTCTCTGAAAGCATTGCAGGGGTCATGACAATCCGTGCATTCAAAAATCAAAATAAATTTTGTGAAGAAAATCTCAAACGGGTGAATGCTAATTTGCGAATGGATTTCCACAACTACAGTTCTAACGAATGGTTGGGAGTACGCTTAGAATTGCTTGGAAGCTTTGTCTTTTGCATTTCTGCCATGTTCATGATCATCTTACCCAGCAATATCATAAAGCCTGAAAATGTTGGCTTAACTCTCTCTTATGGGATGTCCTTAAACGCTGTCTTGTTCTGGTCTGTATACATGAGCTGTATTATCGAAAACAAAATGGTGTCTGTTGAGAGGATAAAGCAGTTCACAGATATTCCATCGGAACCAGCGTGGAATATCAAGGATCGTCTGCCTCCTTCAAATTGGCCAGGTCAAGGCAATGTAGATATCAAAGGCTTGCAGAGCTTGGAACGCTGTCAACTAAAAGAGGTTGTTGCTGCCAAGCCTGAAAAACTTGACTCTTTAGTGGCTGATAACGGAGAGAACTGGAGTGTGGGGCAGAGACAGTTGCTTTGTCTTGGGCGAGTTATACTAAAGAGAAGCCGGCTCTTGTTCATGGATGAGGCAACTGCTTCTGTTGATTCTCAAACGGATGGCGTGATTCAGAATATCATTAGAGAGGACTTTGCAGCATGTACCATCATCAGTATTGCTCACAGAATACCCACAGTTATGGACTGTGACAAAGTTTTAGTTGTAGATGCAGGGCGAGCGAAAGAGTTTGATAAGCCTTCCAACTTGCTTCAGAGACAATCTCTGTTTGGGGCATTAGTTCAAGAGTATGCCAATCGCTCCAATGGAATATAA 4239 0.4291 MVEGAVSPGSTNMSFTSLSCAFPEKQNSGDTFLSTLLQWLGFIFLSPCPQRAILSFVDVVLLLFLLVFAVTKLWKRFTSNDASHTQLHRPLIRKSPPIFSTTIRFKLTLTAAVVLTVLYTVACVFAFRTSSSEVQWKQVDEVFWLVQAITHAVLAVLIIHEKRFEAVTHPRSVRVYWIVNFFVILFFAVSAVIRLVSVDVDETKGFKVDDGVSFVSLPLSLFLFFVAVKGATGVVLSEETRPLVDEETKLYEGKSEVTGYASASVLSKAFWIWINPLLRKGYKSALKIDEIPTLSPEHRAERMSSVFESKWPKSNENSKHPVRVTLLRCFWKELAFTAFLAIIRMCVMFVGPVLIQSFVDFTSGKRSSPYEGYYLVLILLVAKFIEVMATHHFNFNAQKLGMLIRSTLIPSLYRKGLKLSFSARQDHGVGTIVNYMAVDTQQLSDMMLQLHAIWMMPIQVGIGLVILYKCLGASVITAFFGLVCVFVYSLIGNRRNNTFQFNVMTNRDSRMKGVNEMLNYMRVIKFQAWEDHFNQRILDFRTTEYGWLSKLMFSISSTIVVMWSTPLMISTITFGTAMLLGVKLDAATVFTATTVFKLLQEPIRTFPQSMISLSQAMISLERLDKFMLSRELLNDSVERVEGCGGQTAVEIIDGTFSWDDDSLLKDLKNINLEIKKGELTAIVGTVGSGKSSLLASILGEMRKVSGKVRVSGSVAYVAQTSWIQNGTIEENILFGLPMNRQWYNEVIKVCCLERDLELMDYGDQTEIGERGINMSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKDKTTILVTHQVDFLHNVDRILVMRDGVIVQSGKYNDILDSGMDFKALVVAHETSMELVEQGGVIPGENLNVPTKSPEAASELKVANGESNSLDQPESSKKSSKLIKEEGKETGKVSLDIYKLYLTEAFGWWGVTLVLVLSMLWQASLMASDYWLAYETSEERAKIFNPSLFMSIYAIIAVVSIILVSARTYLFTLWGLKTAQTLFTQILRSILHAPMSFFDTTPSGRILSRASTDQTNVDVLLPLFTGVVMAMYITVLSIFIITCQNSWPTVFLIIPLLWLNIWYRGYYLASSRELTRMDSITKAPVIHYFSESIAGVMTIRAFKNQNKFCEENLKRVNANLRMDFHNYSSNEWLGVRLELLGSFVFCISAMFMIILPSNIIKPENVGLTLSYGMSLNAVLFWSVYMSCIIENKMVSVERIKQFTDIPSEPAWNIKDRLPPSNWPGQGNVDIKGLQSLERCQLKEVVAAKPEKLDSLVADNGENWSVGQRQLLCLGRVILKRSRLLFMDEATASVDSQTDGVIQNIIREDFAACTIISIAHRIPTVMDCDKVLVVDAGRAKEFDKPSNLLQRQSLFGALVQEYANRSNGI 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02831 1412 MobiDBLite consensus disorder prediction 907 927 - -
Cca03g02831 1412 Gene3D ABC transporter type 1, transmembrane domain 314 631 IPR036640 GO:0005524|GO:0016021
Cca03g02831 1412 Gene3D ABC transporter type 1, transmembrane domain 918 1253 IPR036640 GO:0005524|GO:0016021
Cca03g02831 1412 Coils Coil 1412 1412 - -
Cca03g02831 1412 Coils Coil 1143 1163 - -
Cca03g02831 1412 Gene3D - 632 883 IPR027417 -
Cca03g02831 1412 SUPERFAMILY ABC transporter transmembrane region 952 1252 IPR036640 GO:0005524|GO:0016021
Cca03g02831 1412 CDD ABC_6TM_ABCC_D1 336 623 IPR044746 GO:0140359
Cca03g02831 1412 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 97 1278 - -
Cca03g02831 1412 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 1278 1410 - -
Cca03g02831 1412 Pfam ABC transporter transmembrane region 336 602 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca03g02831 1412 Pfam ABC transporter transmembrane region 958 1214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca03g02831 1412 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 649 872 IPR003439 GO:0005524
Cca03g02831 1412 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 957 1235 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca03g02831 1412 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 335 615 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Cca03g02831 1412 CDD ABCC_MRP_domain1 649 848 - -
Cca03g02831 1412 SUPERFAMILY ABC transporter transmembrane region 326 627 IPR036640 GO:0005524|GO:0016021
Cca03g02831 1412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 648 869 IPR027417 -
Cca03g02831 1412 CDD ABC_6TM_ABCC_D2 955 1247 IPR044726 GO:0140359
Cca03g02831 1412 ProSitePatterns ABC transporters family signature. 774 788 IPR017871 GO:0005524
Cca03g02831 1412 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1152 1404 IPR003439 GO:0005524
Cca03g02831 1412 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 97 1278 - -
Cca03g02831 1412 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1278 1410 - -
Cca03g02831 1412 Pfam ABC transporter 667 800 IPR003439 GO:0005524
Cca03g02831 1412 SMART AAA_5 676 849 IPR003593 -
Cca03g02831 1412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1278 1403 IPR027417 -
Cca03g02831 1412 Gene3D - 1256 1410 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02831 Cca-Chr3 49662322 49673893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02831 605 865 Calmodulin-binding Proteins AT2G36910 29.137 1.52e-23 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02831 - K05666 gmx:100808752 2011.88