Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02799 ATGGCGGCAGATGCGGCTTTCTTCTTTTCTGTGGCATCAGTGGTGGAGGACGTGCTCCAACAGCACGGTCCTCGTCTCAAAGATCTTGATTTGGAATCTAGGAAGGCAGAAGAAGCTGCATCAAGAAGGTATGAAGCAGCAGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCAGAGCCATCTGAGGAGGAGTTTAGGCTTGGTTTGAGAAGTGGAATTATTCTATGTAATGTTATTAATAAAGTTCAATCCGGGGCTGTGCCTAAGGTTGTGGAGAGCCCTGTTGATTCTGCATTGATCCCTGATGGGGCACCCTTAACAGCATATCAGTATTTTGAAAACGTGAGGAATTTCTTGGTTGCTGTCCAAGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCGTCTAGGATTGTCAATTGCGTGTTGGCCCTGAAATCCTATAGTGAATGGAAAATGAGCGGGTCAAATGGTGTGTGGAAATTTGGCGGAAATCTCAAACCTACTGTATCTGCAAAATCTTTTGTGAGAAAAAACTCGGAGCCATTTACTAATTCCTTGTCAAGGACTTCATCATTGAATGATAAATCTCTCAACGCTCTTAATTCTGACATTGAGTCTAATAAAATGTTGCAGTCTGGTTCCCATTCTTTGAGTACGCTTGTTCGTGCAATTCTATCAGATAAGAAGCCAGAAGAAGTTCCAACGTTGGTTGAATCTGTTTTGAACAAGGTTGTAGAGGAGTTTGAGCAACGAATTGCAAGCCAGGATGAACAGACAAAAATAACTCCAAGAGATCCTGTTTCTCAAAGCAACGGGTCTGTTATTGCAGATGCAAAGGGTGAGAAGAATATTCACGTTGTAGCAAAAAAGGAAGATTGCATTCATAAAAATCAAGTTTCTTCAATGGTAACACAAAATGAGGATCGCATTCATAAAAATCAAGTTGCTGATGAGGAATCACAAAGGCAACTTCTGAAGCAGCAGATGCTCTTTGACCAACAGCAAAGAGAAATTCAAGAGCTAAGGCATACTCTTCACACCACAAAATCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATCTTGGCATGCACATTCATGGCTTAGCTAATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTCCTGGACAATCAAACCATTTAAGCGCAGTGGAAAGTATAGACGATGGAGTTATCACCGTTAATGTTCCTTCAAAGAATGGGAAGGGACGCAGGTCCTTCAATTTTAACAAAGTCTTTGGACCATCTGCGACTCAAGCCGAGGTTTTCCTAGATATGCAGCCACTCATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTCACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAGGCGATTTGTTTCATATAGCAGATCAAAGAAAAGACACTTTCCACTATGACGTTTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGGGATCTTCTGGTCACTGATGGAACAAACAAAAGATTAGAAATTCGCAGTAGTTCTCAAAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCCCTGTATCATCAACTATTGATGTTATTGAACTAATGAACCTGGGGCAAAGGAACCGTGCAGTTGGTGCAACAGCCCTTAATGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTACGCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTAGATAAATCTGAGGCCACAGGAGATAGACTAAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACACGTTCCTTACAGAAATAGTAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCTAAGACACTAATGTTTGTTCACGTAAGTCCAGAGAGTGATGCTATTGGAGAAACAATTAGTACCTTAAAATTTGCTGAAAGAGTTGCCACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATAGTGCAGATGTTAAAGAGCTCAAAGATCAGATTGCCAGCCTCAAAGCAGCATTGGCAAGAAAGGAAGGAGAATCAGATTATTCTTTATCCAGCAGCTCTGAGAAATACAGGACAAAGGCCAGTGAACTATCACCTTATCCTGACAGTGGGAATCAGCTTGGATACCGACGACCAATGGTTGAGGTTGGCAACATTGAGCTTGAGAGTAACACGACAGTGAGGAAGAAAACTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCACCATGGCCCCCAGTGAATAATAATAATAGCCTTGGACAAAACTATGCGGAGGATGACAAAGAAACTGGTTCTGGAGAATGGGTTGATAAGGTCATGGTAAACAAAACTGAGAACCTCTTGGAGTGTTGGCAAGCAAGCAATGGGAACTTATCTGAGGCTTTTTATCAGAAATACCCCAAAATGCACTCAGAACAATCCTATAACATGTTCATCGGAGGCAACCACTTTAACATTGCTGGTTCAGATGACACGGATGACCTTGATGCTGCAACCAGTGATTCCTCCGAACCTGACTTACTTTGGCAATTTAATCATTCCAAACTTAGCAGCATTGGACCAAAGACTATGAGATCTATCTCAAAAACAGCAAAAAGCCCAGAGTTTAGCAAGAATGGTGTTCATTCTTCTCCTCTAGGTCCTTCACCTTCATTCAAACAATCAAATGGTGTCCCACATCGAACAGGAAGGCATCCAGCTCCAGTTGACGTCAAACGTAGAACTGGGAGTAGAAAGTAA 3030 0.4185 MAADAAFFFSVASVVEDVLQQHGPRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLTAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCVLALKSYSEWKMSGSNGVWKFGGNLKPTVSAKSFVRKNSEPFTNSLSRTSSLNDKSLNALNSDIESNKMLQSGSHSLSTLVRAILSDKKPEEVPTLVESVLNKVVEEFEQRIASQDEQTKITPRDPVSQSNGSVIADAKGEKNIHVVAKKEDCIHKNQVSSMVTQNEDRIHKNQVADEESQRQLLKQQMLFDQQQREIQELRHTLHTTKSGMQFMQMKFHEEFSNLGMHIHGLANAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQSNHLSAVESIDDGVITVNVPSKNGKGRRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMTGPKEITEKSQGVNYRALGDLFHIADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGATLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPESDAIGETISTLKFAERVATVELGAARVNKDSADVKELKDQIASLKAALARKEGESDYSLSSSSEKYRTKASELSPYPDSGNQLGYRRPMVEVGNIELESNTTVRKKTQSFDFDEISANSPPWPPVNNNNSLGQNYAEDDKETGSGEWVDKVMVNKTENLLECWQASNGNLSEAFYQKYPKMHSEQSYNMFIGGNHFNIAGSDDTDDLDAATSDSSEPDLLWQFNHSKLSSIGPKTMRSISKTAKSPEFSKNGVHSSPLGPSPSFKQSNGVPHRTGRHPAPVDVKRRTGSRK 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02799 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 772 IPR027417 -
Cca03g02799 1009 CDD KISc_C_terminal 411 740 - -
Cca03g02799 1009 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Cca03g02799 1009 PRINTS Kinesin heavy chain signature 486 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 PRINTS Kinesin heavy chain signature 608 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 PRINTS Kinesin heavy chain signature 639 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 PRINTS Kinesin heavy chain signature 688 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1006 - -
Cca03g02799 1009 Pfam Kinesin motor domain 419 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Cca03g02799 1009 MobiDBLite consensus disorder prediction 950 988 - -
Cca03g02799 1009 MobiDBLite consensus disorder prediction 995 1009 - -
Cca03g02799 1009 Gene3D Kinesin motor domain 408 779 IPR036961 -
Cca03g02799 1009 SMART ch_5 42 160 IPR001715 GO:0005515
Cca03g02799 1009 MobiDBLite consensus disorder prediction 773 796 - -
Cca03g02799 1009 ProSiteProfiles Kinesin motor domain profile. 413 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1006 - -
Cca03g02799 1009 Gene3D - 27 184 IPR036872 -
Cca03g02799 1009 MobiDBLite consensus disorder prediction 771 803 - -
Cca03g02799 1009 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Cca03g02799 1009 MobiDBLite consensus disorder prediction 950 1009 - -
Cca03g02799 1009 SMART kinesin_4 411 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca03g02799 1009 Coils Coil 745 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02799 Cca-Chr3 49342106 49349019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02799 401 774 Calmodulin-binding Proteins AT5G65930 41.379 1.14e-78 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02799 K10406 - gmx:100795476 1730.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02799 03 49342106 49349019 Cca03g02799 03 49342106 49349019 ECH
Cca03g02799 03 49342106 49349019 Cca02g00531 02 11402894 11404526 PCT