Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02775 ATGGCTTCTGAATATGAAGGAGATTTGCAAATGGATGAGATAAAAAGGAAGAAGAGGGCCCTAAACCGTGAATATGCAAAGAAATCCCGATTGAGGAAGCAAAAGCAGTTGGAGGATTTGGCTCATGAAGTGAACAAATTGCAAAGTGCAAACAAAAAGCTGGTAGAGATCATTAAGGCGAAGGAGGAAGCCTATGCGGAAAACAAAGTTGCTAACAACATCTTGAGGACTCAAACTATGGAATTGGCCGATCGATTGCGCTTTTTGAACTCTATCATTCAAGTTCAAGATCTTAAGCCATAG 303 0.4059 MASEYEGDLQMDEIKRKKRALNREYAKKSRLRKQKQLEDLAHEVNKLQSANKKLVEIIKAKEEAYAENKVANNILRTQTMELADRLRFLNSIIQVQDLKP 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02775 100 Pfam bZIP transcription factor 13 69 IPR004827 GO:0003700|GO:0006355
Cca03g02775 100 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 12 54 IPR004827 GO:0003700|GO:0006355
Cca03g02775 100 Coils Coil 11 67 - -
Cca03g02775 100 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 96 - -
Cca03g02775 100 Gene3D - 14 69 - -
Cca03g02775 100 SUPERFAMILY Leucine zipper domain 15 62 IPR046347 GO:0003700|GO:0006355
Cca03g02775 100 PANTHER BZIP TRANSCRIPTION FACTOR 53 4 96 - -
Cca03g02775 100 SMART brlzneu 11 74 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02775 Cca-Chr3 49112022 49112324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02775 12 95 bZIP Transcription Factor Family AT3G62420 48.810 9.78e-20 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca03g02775 bZIP_1 5.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02775 K25786 - gmx:100813053 115.931