Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02775 | ATGGCTTCTGAATATGAAGGAGATTTGCAAATGGATGAGATAAAAAGGAAGAAGAGGGCCCTAAACCGTGAATATGCAAAGAAATCCCGATTGAGGAAGCAAAAGCAGTTGGAGGATTTGGCTCATGAAGTGAACAAATTGCAAAGTGCAAACAAAAAGCTGGTAGAGATCATTAAGGCGAAGGAGGAAGCCTATGCGGAAAACAAAGTTGCTAACAACATCTTGAGGACTCAAACTATGGAATTGGCCGATCGATTGCGCTTTTTGAACTCTATCATTCAAGTTCAAGATCTTAAGCCATAG | 303 | 0.4059 | MASEYEGDLQMDEIKRKKRALNREYAKKSRLRKQKQLEDLAHEVNKLQSANKKLVEIIKAKEEAYAENKVANNILRTQTMELADRLRFLNSIIQVQDLKP | 100 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02775 | 100 | Pfam | bZIP transcription factor | 13 | 69 | IPR004827 | GO:0003700|GO:0006355 | |
Cca03g02775 | 100 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 12 | 54 | IPR004827 | GO:0003700|GO:0006355 | |
Cca03g02775 | 100 | Coils | Coil | 11 | 67 | - | - | |
Cca03g02775 | 100 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 4 | 96 | - | - | |
Cca03g02775 | 100 | Gene3D | - | 14 | 69 | - | - | |
Cca03g02775 | 100 | SUPERFAMILY | Leucine zipper domain | 15 | 62 | IPR046347 | GO:0003700|GO:0006355 | |
Cca03g02775 | 100 | PANTHER | BZIP TRANSCRIPTION FACTOR 53 | 4 | 96 | - | - | |
Cca03g02775 | 100 | SMART | brlzneu | 11 | 74 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g02775 | Cca-Chr3 | 49112022 | 49112324 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02775 | 12 | 95 | bZIP Transcription Factor Family | AT3G62420 | 48.810 | 9.78e-20 | 76.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Cca03g02775 | bZIP_1 | 5.4e-08 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02775 | K25786 | - | gmx:100813053 | 115.931 |