Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02774 ATGGCTTCAATTCAACCTTGCTCGAGTTCGGGATATAACAGAGATTCGCAAATGGAGGAGAAGAAAACAAATAAAATGTTGAATTGTGAATCAGCGAAGCGAACGCGAATGAGGAAGCAGAAACAATTAGAGAATTTAAATATTGAAGTCAACAAATTGCAAGGTGCGAACAAGAAGCTGGGTGAGTGCATAAAGGCCAAGGAAGAAGCATACATTGAGAGCGAAGCTGCTAACAACATCTTGAGGGCTCAAACGAAGGAATTGGCTGATCGACTCTGCTTTTTGAACTCAATCACTCAAGTTGTTAAAGACAACAATCATTTTTCTATTGAGATTTCAAGGATTAAGCCCTTGTAG 357 0.395 MASIQPCSSSGYNRDSQMEEKKTNKMLNCESAKRTRMRKQKQLENLNIEVNKLQGANKKLGECIKAKEEAYIESEAANNILRAQTKELADRLCFLNSITQVVKDNNHFSIEISRIKPL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02774 118 MobiDBLite consensus disorder prediction 1 24 - -
Cca03g02774 118 CDD bZIP_plant_GBF1 28 71 IPR045314 GO:0003700|GO:0006355
Cca03g02774 118 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 115 - -
Cca03g02774 118 Coils Coil 29 56 - -
Cca03g02774 118 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 115 - -
Cca03g02774 118 SUPERFAMILY Leucine zipper domain 23 66 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02774 Cca-Chr3 49103688 49104044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02774 1 115 bZIP Transcription Factor Family AT3G62420 40.833 7.20e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02774 K25786 - ccaj:109814734 234.187