Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02759 ATGGGTTTCAACAAAAACCTTCTCCTATTCGTGTCACTATCTACCCTCCTCATATCCACCAACGCCATGCCCCTATtctccctcatcgcaccctctccctctccctcttcctccccatcACAACACATCTTCGACAAAGCCCTAAAAGCCTCCCAAAATATCTTCCAGCCCGAGCTCATAGAGTTTTGCCAAGGCACAGAAAACCCCACTCTCTGCGCCGACACCATCGCCCCATTGTTCCACGGAACCTTCGACCCCATCAAGGCCCTCGAGACCGAAATCCAAGCCACCCTCAACCAGACCCTCAAGGTGGCTTCCGTCATCGCCAATTCCCTCGTCAACCCCGCCACCGACAAAAACGCCCTCGACGCCCTCGACATATGCAAGTCGCAGTACGAGAGCATCGTCGACACCACCAAGGAGTCCTTGGAGCTTTTGAGCCGACAGAACGTGGTCGATGCTTACTACAAGTTCAACTCCGTTATCTCCTACCAATCCTCGTGCGAGGACGCCTTCGCTGAATCTCCCGGCGTTGAAAATCCCTTCGCTCACGACTCCTTGACCGTGTTTCAGCTCGGTGGCAATTGCTTGGCCATCATGGATGGCTTGGTTAATGGCCGCAACCGCTTCTAG 633 0.5024 MGFNKNLLLFVSLSTLLISTNAMPLFSLIAPSPSPSSSPSQHIFDKALKASQNIFQPELIEFCQGTENPTLCADTIAPLFHGTFDPIKALETEIQATLNQTLKVASVIANSLVNPATDKNALDALDICKSQYESIVDTTKESLELLSRQNVVDAYYKFNSVISYQSSCEDAFAESPGVENPFAHDSLTVFQLGGNCLAIMDGLVNGRNRF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02759 210 SMART PMEI_2 55 199 IPR006501 GO:0004857
Cca03g02759 210 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 207 - -
Cca03g02759 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 203 IPR035513 -
Cca03g02759 210 CDD PMEI-like_2 56 200 - -
Cca03g02759 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 204 IPR035513 -
Cca03g02759 210 PANTHER PECTINESTERASE 1 207 - -
Cca03g02759 210 Pfam Plant invertase/pectin methylesterase inhibitor 62 199 IPR006501 GO:0004857
Cca03g02759 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 203 IPR006501 GO:0004857
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02759 16 205 Carbohydrate Esterase AT3G05610 22.222 4.10e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02759 - - gmx:102660506 237.269