Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02758 ATGTCAATCGGTATATTGAAAAATGTTCAAGGCTTGGTGCTGAAATGGATGCTTACATTATCTTGCCTGGTATTTACGATTGAGTCTGGTGCAAATGATAAAACAATGGAGCCCATTTCTTTATATGATTCTAGATCACCTTTGGCCTTTGTTGTTGTTCATGATCTACCTCTACCAACAAATCTCCATGTGTCAAAGCACGTGCTTTCTCGTGGTGTACCAATTGCAGCACTGTCACCGGTCAATCCTCCTTCATATGGTCATTTCACAAGTAATGACCAATCCCCTACAAGTTCCCATTTATCCGTACCATTCAAGAAGAAGAGTGAAATGAAACCTCCAATCTCTGGCTTTAAAGATATTTCCCCTGTGCATTCTATTGCAGCTGCAGGCCCTTCCGCTTCGGCTGAGCCACCATTGTCTCCATATGCTTCTAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGGCAGTAAGAATTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTATGAATGTCTCTCAAAACCCTAATTGGAATGTTTTTCTTGATGAATTAGCTGCCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCACCATATCAACTTTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGAAGTTTCTAAAATAAACTCTACGCTTTCAATGCATAAGGTTCAACTAGACCCTGGATTAGTGGGTGGATACAAACTTCTCAACATAACGTGGTTTGAACCTCCGCCGCCTTCTCAAGCTCCTACTTTAGCTGCATCACCTGTGAAAACACCTTTGTATCATTCACCTACTGCAACATCATCGAGTTCTCCAGAAAGAGGAAGGGATTCAAATTTGTTTCTTATTCTTGGAATTGCTATTGGCATATTCTTCATTGCTATTGTATCCATACTTGTATTTTGTTTATGTACATACCTGCCAAAAGCGAACACACCTCCCATAGAAACTGAAAAGCCAAGGACAGAGAGTGCAATTTCAACTGTGGGTTCTCTTCCCCACCCAACTAGTACACGGTTTATTGCTTTTGAAGAGCTTAAAGAAGCAACAAACAATTTTGAACCAGCGAGCGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGCATCTTAAACGATGGTACTCCTGTAGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAGGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGCAACCTTGTAAAACTAGTGGGATACTATAGTAATCGTGACTCATCACAGAATTTACTTTGCTATGAGCTTGTCCCTAATGGAAGCTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATCAGTTGTCCtttggattgggacaccagaatgaagattgccctagatgctgcaaggggactttcatacctgcatgaagactctcagccctgtgtaatacatagagacttcaaggcatccaacatattgcttgagaacaactttcatgctaaggttgcagattttggTCTTGCTAAGCAAGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAATATGCCATGACTGGACACCTGCTTGTTAAAAGTGATGTTTATAGCTATGGTGTTGTCTTGCTGGAACTGCTTACTGGTAGGAAGCCTGTGGACATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGAACGGCTGGAAGAGATTGCTGATCCAAAACTTGGGGGAAAGTATCCGGTGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAATCAAAGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCTGTGTCAGCCTCATCCAATACACGACCCAACCTGAGACAGTCCTCTAGCACTTTTGAATTTGATGGGACATCTTCAATGTTCTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGACAATGACAACATTTCTAGGACTGTGGTTTTCTCTGAGGATCTTTGTGAAGGACGATGA 2160 0.3935 MSIGILKNVQGLVLKWMLTLSCLVFTIESGANDKTMEPISLYDSRSPLAFVVVHDLPLPTNLHVSKHVLSRGVPIAALSPVNPPSYGHFTSNDQSPTSSHLSVPFKKKSEMKPPISGFKDISPVHSIAAAGPSASAEPPLSPYASNCCKQDMVLKRGSKNCHCAYPIKLDLFLMNVSQNPNWNVFLDELAAQLGLRNTQIELINFYVLTISTLNISMNITPHKGISFSANEVSKINSTLSMHKVQLDPGLVGGYKLLNITWFEPPPPSQAPTLAASPVKTPLYHSPTATSSSSPERGRDSNLFLILGIAIGIFFIAIVSILVFCLCTYLPKANTPPIETEKPRTESAISTVGSLPHPTSTRFIAFEELKEATNNFEPASVLGEGGFGRVFKGILNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGISCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKERLEEIADPKLGGKYPVEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVSASSNTRPNLRQSSSTFEFDGTSSMFSSGPYSGLSAFDNDNISRTVVFSEDLCEGR 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02758 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Cca03g02758 719 PANTHER OS01G0750732 PROTEIN 8 719 - -
Cca03g02758 719 Gene3D Phosphorylase Kinase; domain 1 339 452 - -
Cca03g02758 719 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 8 719 - -
Cca03g02758 719 ProSiteProfiles Protein kinase domain profile. 375 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02758 719 SUPERFAMILY Protein kinase-like (PK-like) 349 652 IPR011009 -
Cca03g02758 719 Gene3D Transferase(Phosphotransferase) domain 1 453 673 - -
Cca03g02758 719 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Cca03g02758 719 Pfam Protein kinase domain 378 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02758 719 CDD STKc_IRAK 381 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02758 Cca-Chr3 48997764 49005774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02758 12 719 Receptor kinase-like Gene Family AT4G02010 66.620 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Cca03g02758 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02758 - - gmx:100775615 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02758 03 48997764 49005774 Cca03g02758 03 48997764 49005774 ECH
Cca03g02758 03 48997764 49005774 Cca02g01293 02 31066995 31073726 PCT