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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g02744
ATGGAGAGGAGTTTATCAGAGAATGGTTATGGTTCTTATGGCAGTGAAGAGGAGATTTCAATAACCAAGGGTCCATGGACAGAGCAAGAGGATTCTGTTCTCTTCAATTACATAACGCTCCACGGTGAAGGTCATTGGAACTCTGTCGCTCGCTACACAGGCCTAAAACGAACGGGGAAAAGCTGCAGATTAAGATGGTTGAACTACTTGCGTCCTAACGTTCGACGTGGGAACATAACCCTCCAAGAACAGCTCTTGATTCTCGACCTTCATTCACGTTGGGGCAACCGGTGGTCGAAAATAGCGGAACACTTACCTGGTAGAACAGACAACGAGATTAAAAACTACTGGAGAACGAGGGTGGTGAAGCAGGCTAAGCAACTGAAGTGTGACGTCAACAGCAAGCAATTCAGGGACACGTTGCGCTTTGTCTGGATGCCACGTATGCTGGAGCGGATCCAGGCTCAAGCATCCTCCAACCATGCTCAAACAACCTTAAACGACACCGCTCAAGCGCACAGCGAACCTTGTGGAGCTACCAACACCGGATTGTTCTCAGAGGCGTCATCTGCAATTGAACTTCACGCGCCTTCTTTTTCTGACTCCAGCGCGTGTTACAATTTGAGATCGTGTAGTGCAGAAGAAGGTAGCAGTAGCAACCTGTATAGCTACTCGGAGATACCCGAAAATGGTTTCGGTGGCGCCGACTTGTGGACTGATGAAAATATTTATTTTCTACAACAGCAGCTAGCTGATGATTTCTGA
765
0.4784
MERSLSENGYGSYGSEEEISITKGPWTEQEDSVLFNYITLHGEGHWNSVARYTGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDTLRFVWMPRMLERIQAQASSNHAQTTLNDTAQAHSEPCGATNTGLFSEASSAIELHAPSFSDSSACYNLRSCSAEEGSSSNLYSYSEIPENGFGGADLWTDENIYFLQQQLADDF
254
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g02744
254
PANTHER
MYB TRANSCRIPTION FACTOR-RELATED-RELATED
14
195
IPR044676
GO:0003700|GO:0006355|GO:0043565
Cca03g02744
254
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
18
74
IPR017930
-
Cca03g02744
254
ProSiteProfiles
Myb-like domain profile.
18
70
IPR001005
-
Cca03g02744
254
Gene3D
-
22
75
-
-
Cca03g02744
254
Pfam
Myb-like DNA-binding domain
23
70
IPR001005
-
Cca03g02744
254
Pfam
Myb-like DNA-binding domain
76
119
IPR001005
-
Cca03g02744
254
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
75
125
IPR017930
-
Cca03g02744
254
SMART
sant
22
72
IPR001005
-
Cca03g02744
254
SMART
sant
75
123
IPR001005
-
Cca03g02744
254
Gene3D
-
80
121
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g02744
Cca-Chr3
48824463
48825647
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g02744
16
253
MYB Transcription Factor Family
AT2G47190
50.593
7.28e-85
252
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Cca03g02744
Myb_DNA-binding
9.5e-15
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g02744
K09422
-
gmx:100819467
389.037
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g02744
03
48824463
48825647
Cca03g02744
03
48824463
48825647
ECH
Cca03g02744
03
48824463
48825647
Cca02g01310
02
31336247
31337264
PCT
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