Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02740 ATGGAAGAAACATTTGTACCCTTTGAAGGGATCAAGAATGATCTGAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGTTGGGTGGAATCAAAGCAGGTTTAAGGATTTGGGCCCCCACTACATACATATTCTTTGCTTCCGCAATACCTGTCATCTCATTCGGGGAACAACTAGAGCGAGATACTGatgGTGTTCTAACTGCAGTTCAAACATTGGCTTCCACTTCAATATGTGGCATTATACACTCAATCCTTGGAGGTCAACCTTTGCTGATTTTAGGAGTGGCAGAACCTACCGTGATCATGTACACATTCATGTTCAATTTTGCAAAAGAGAGACCAGAGTTGGGCCGGAATATGTTTCTGGCATGGACTGGATGGGTATGTGTCTGGACTGCACTGTTGCTATTCTTACTGGCCATCTTAGGGGCTTGCTCTATAATCAACAGGTTTACACGTATTGCTGGAGAGTTGTTTGGCCTACTTATTGCAATGCTCTTCATGCAACAAGCTATTAAAGGACTCGTGGATGAGTTTCGTATACCAGAGAGAGAAAATCCAAAATCAATTGAGTTTATACCTTCATGGAGATTTGCTAATGGGATGTTTGCTTTAGTCCTCTCGTTTGGCCTTCTCCTCACTGGATTAAGAAGCAGAAAGGCTAGGTCATGGCGTTATGGTACTGGTTGGCTTCGCAGCCTAATAGCTGACTATGGTGTGCCACTTATGGTCCTAGGTTGGACAGGTGTGTCCTACATACCAGCTGCAAGTGTTCCACATGGTATCCCAAGGCGCTTGTTCAGCCCAAATCCATGGTCACCGGGTGCATATGAGAATTGGACTGTTATTAAGGATATGGTCCAAGTTCCTGTTGTCTACATAATCGGAGCATTTATCCCTGCAACCATGATTGCAGTGCTTTATTACTTTGACCACAGTGTGGCATCCCAGCTTGCCCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTATGACTTGCTCCTTTTGGGTTTTTTGACCTTAATGTGTGGCCTTATTGGAATTCCTCCTTCAAATGGAGTCATACCACAGTCTCCAATGCACACAAAGAGTCTGGCAACTCTTAAACATCAGTTGCTTCGTAACAAACTGGTGGTAGCCGCACGAAAAAGTATGGGGAAGAATGCTAGTTTAGGACAGTTATATGGCAACATGCTAGAAGCTTACCATCAAATGCAGACGCCTCTTATTTACCAGGACCCCTCTGCTAGAGCACAAGGACTAAAAGAACTTAAAGAATCAACCATTCAAGCGGCTACTAGTATGGGAAACATGGATGCTCCAGTAGATGATACTGTATTTGATGTTGAGAAAGAAATAGACGACCTTCTACCTGTTGAGGTAAAGGAACAGCGTCTCAGTAACTTGCTTCAAGCAATAATGGTGGGAGGATGCGTTGCAGCCATGCCTGTACTCAAGAAGATCCCAACCTCAGTCCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGTTTGCCAGGAAACCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGAAGATACAAGGTGCTTGAGGATTACCATGCAACTTTTGTAGAAACAGTTCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACCGTTTATCTTCTTGTATGTTTTGGACTAACATGGGTTCCTATTGCCGGGGTCATGTTTCCTATGATGATTATGCTCTTAGTTCCAGTAAGACAGTACTTTCTCCCCAAATTTTTCAAAGGGGCACACCTTCAAGACTTGGATGCAGCAGCTTATGAAGAACAAACAGCTTTACCATTCAACCTTGCAACACAATCAGAGTTTGGAGGTGGTGCTACTCAAGTTGGAGAAGGTGAGATCCTTGATGAAGTTATCACTAGAAGTCGTGGTGAGTTTAGGCACACTAGCAGTCCAAAGATCACAAGCTCAACCCCAACACCAGTAACTGATCATAAAAGCCATTTAAGTCCACGTCTCTCGTTTAGTTCTCGATTGGGAGAACTCAAAACTGAGCAGAGTCCTCGGTCTGGTGCAAGAGGTTCCCTCAGTCCAAAAGCAGGAGAAGTGAGATTATCGAATCTGGGAAGAAGTCCTCTTAATCCGGACTCAAAGCATCAGGACCACAACTAA 2172 0.4378 MEETFVPFEGIKNDLRGRLMCYKQDWLGGIKAGLRIWAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTSICGIIHSILGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNMFLAWTGWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPERENPKSIEFIPSWRFANGMFALVLSFGLLLTGLRSRKARSWRYGTGWLRSLIADYGVPLMVLGWTGVSYIPAASVPHGIPRRLFSPNPWSPGAYENWTVIKDMVQVPVVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVVAARKSMGKNASLGQLYGNMLEAYHQMQTPLIYQDPSARAQGLKELKESTIQAATSMGNMDAPVDDTVFDVEKEIDDLLPVEVKEQRLSNLLQAIMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTVYLLVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGAHLQDLDAAAYEEQTALPFNLATQSEFGGGATQVGEGEILDEVITRSRGEFRHTSSPKITSSTPTPVTDHKSHLSPRLSFSSRLGELKTEQSPRSGARGSLSPKAGEVRLSNLGRSPLNPDSKHQDHN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02740 723 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cca03g02740 723 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Cca03g02740 723 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Cca03g02740 723 MobiDBLite consensus disorder prediction 649 693 - -
Cca03g02740 723 PANTHER ANION EXCHANGE PROTEIN 1 703 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cca03g02740 723 Coils Coil 719 723 - -
Cca03g02740 723 MobiDBLite consensus disorder prediction 641 723 - -
Cca03g02740 723 PANTHER BORON TRANSPORTER 2-RELATED 1 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02740 Cca-Chr3 48753538 48758350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02740 1 694 Antiporters AT3G62270 82.590 0.0 1171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02740 K24194 - gmx:100776705 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02740 03 48753538 48758350 Cca03g02740 03 48753538 48758350 ECH