Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02721 ATGGCATTGTCTGTGATAAGAAGAAAAGAAGGTCTAGTTAAACCAGCTGAGGAGACTCCTTTGACCACACTAGACCTATCAGCAATCGATAAATTAGGTGTCCTAAGATGCAACGTTAGAACCTTACACGTCTTCAAACACGGTCCTCAAGCAGCAAGGGTCATAAGAGAGGCTTTGTCCAAAGCACTCGTTCCTTATTACCCTCTTGCGGGACGTCTCATAGAACCCAAACCAGGGTGCCTCCAAATTCAATGCTCTGCCCATGGAGTGTGGCTTGTCGAGGCATCTTCTCATTCCACCCTTCACTCCCTCAATTACTTTGACAACCTTCACTCTATTCCATATGATGATCTTCTTCCCGAGAGTGAGAGCCAATGCATCCAACCCCTCGTGCAAATGCAGGTGACAGAATTTGGTTGCGGGGGTTTTGTGATGGGTCTCATATTCTGCCATAGCATATGTGATGGTCTTGGTGCAGCACAGTTTCTAAATGCAATCGGGGAACTAGCTAGGGGACTGGACAAGCCCAGTGTTGAACCGGTTTGGCAAAGGGACTTTTTCCCGTCTCAACAAATTGCATTGCCACCAAATCCAATACCTCCAATGGCAGAGTACAAGCTAGAGCATGCAAACATAGACATGCCCATGGACCAAATAAAGGGTGTGAAGAGAGAATTTGAACAAGCCACTGGACGCACTTGCTCGGCCTTCGAGGTGGTGGCCGCAGCGTGTTGGGCCTCGCGAACAAGGGCCATTCAATTCCGGCCCAATACTCAACTGAAGCTGGTGTTCTTTGCGAATTGCCGAAATCTGGTGGAGCCTCCTCTGCCCAATGGCTTCTACGGAAACTGTTTCTTCCCGGTCAGCATCAGCGCTTCGTGCGAGTCGCTAACAAACGCATCAATGGTTGACGTGGTGAAGCTTATAAAAGAAGCGAAGGGTAAGGTAGGCGCGGAATTCGGCAAGTACTTGAAGGGTGAGCAGTTGGAGGAGCCGTTTGCGCCTCCACTGACGTACACCACTCTGTTTGTTTCCGAGTGGGGGAGGCTGGGGTTCAACCACGTGGACTACCGGTGGGGCCCACCTGTCCACGTGGTTCCTATACAAGGATCCGCTGTTATACCCGTGGCCATTGTGGGGTCGCTGCCTCTCCCCAACAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGGACCCACATCGTACTCCTTTCCTTCATCACATTCACATTCACATGGCATGCATGAATGTGTAA 1254 0.504 MALSVIRRKEGLVKPAEETPLTTLDLSAIDKLGVLRCNVRTLHVFKHGPQAARVIREALSKALVPYYPLAGRLIEPKPGCLQIQCSAHGVWLVEASSHSTLHSLNYFDNLHSIPYDDLLPESESQCIQPLVQMQVTEFGCGGFVMGLIFCHSICDGLGAAQFLNAIGELARGLDKPSVEPVWQRDFFPSQQIALPPNPIPPMAEYKLEHANIDMPMDQIKGVKREFEQATGRTCSAFEVVAAACWASRTRAIQFRPNTQLKLVFFANCRNLVEPPLPNGFYGNCFFPVSISASCESLTNASMVDVVKLIKEAKGKVGAEFGKYLKGEQLEEPFAPPLTYTTLFVSEWGRLGFNHVDYRWGPPVHVVPIQGSAVIPVAIVGSLPLPNKGIRLMTWCVEDPHRTPFLHHIHIHMACMNV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02721 417 Pfam Transferase family 7 368 - -
Cca03g02721 417 Gene3D - 2 206 IPR023213 -
Cca03g02721 417 PANTHER ACYL TRANSFERASE 4 1 408 - -
Cca03g02721 417 PANTHER ACYL TRANSFERASE 4 1 408 - -
Cca03g02721 417 Gene3D - 209 395 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02721 Cca-Chr3 48565958 48567476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02721 8 367 Monolignol Biosynthesis Gene Families AT5G48930 28.070 8.91e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02721 - - gmx:100783128 668.692