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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca03g02710
ATGGGAAGGCACTCCTGCTGTTACAAGCAGAAACTTAGGAAGGGTCTTTGGTCACCAGAGGAGGATGAAAAACTTCTGAGGCATATAACTAAGTACGGCCACGGTTGTTGGAGCTCAGTTCCTAAGCAAGCAGGTTTGCAGAGGTGCGGCAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTGAAGAGAGGTACATTTTCACAAGAAGAAGAAAATCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGATGGTCTCAAATTGCAGCACAATTGTCAGGGAGGACTGACAATGAAATAAAGAATCTGTGGAATTCTTGCCTGAAGAAGAAACTAAGGCAAAGAGGTATAGACCCTGTGACACATAAGCCACTGTCAGAGGTTGAGAATGGAGAGGGGGACAAAACAAGGAGCCAAGAGTTATCCAATGAATTGAACCTCCTGAATTCAGAGAGTTTCAAGTCAGATGAAGGGTCCTATGAGCAGAGAGCATCTTCAATTGCCCCCAAAGCCTATGAGATGGAAGGCTCTTGCAGCTCCAAGATTAGCACCAAAAACGACACCAACTTGATAGCCAATTGTCCCAACAAAGACTTGTTCCTAGACAGCTACAACACTAGTTGCCAACCCTCAGATTTGATGGGAAATTACCCTCTTCAGATCACTGACACTCTCCCAACCAATTCAAACTCTTCTCATTGGTTCAGCCCTACAACAGCAGCAAGGCCCTTTGACATGAACTCTGAATTCACTTCCAATGTCATGTCTATTCTTCCACCTTCAACCACCTCTTTCCTCCCTAGTACTACTCTTTGCTACAAGCCATCGCTTGCTGTCCCTTCAGAAGATATTTCAATTTCGGCAGCCTCTTTTGCTTTGAATGGACCCAATTACTGGGAAGCCAATGCCTCCAACAGCAGCAATGGAAGCAACACAAGGGATGGCAGCAGAGAAATGACAAGTGGCAAGAACAGTATGCTCTCTTCTTGGGGATTCACAGAAGAAGCCAAGTGGTCTGAGTACCTCCACAATCCAATGTTAATGCTGGCAGCTCCTGAATCATTGTGCAACCAAATAAGGCCAGCCACACATTTTGTACCTGATGGTAACACTTTAGGGGCCATATTATTGCCTGATTCCAAAGAGCAACAACAACAGTCCCAAACTTCTAGCATCTTCTCCAAAGACATCCAGAAGTTAACAGCAGCCTTTGGACATATATAA
1236
0.449
MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLSGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEVENGEGDKTRSQELSNELNLLNSESFKSDEGSYEQRASSIAPKAYEMEGSCSSKISTKNDTNLIANCPNKDLFLDSYNTSCQPSDLMGNYPLQITDTLPTNSNSSHWFSPTTAARPFDMNSEFTSNVMSILPPSTTSFLPSTTLCYKPSLAVPSEDISISAASFALNGPNYWEANASNSSNGSNTRDGSREMTSGKNSMLSSWGFTEEAKWSEYLHNPMLMLAAPESLCNQIRPATHFVPDGNTLGAILLPDSKEQQQQSQTSSIFSKDIQKLTAAFGHI
411
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca03g02710
411
MobiDBLite
consensus disorder prediction
123
143
-
-
Cca03g02710
411
ProSiteProfiles
Myb-like domain profile.
62
112
IPR001005
-
Cca03g02710
411
ProSiteProfiles
Myb-like domain profile.
9
61
IPR001005
-
Cca03g02710
411
CDD
SANT
17
61
IPR001005
-
Cca03g02710
411
PANTHER
HOMEODOMAIN-RELATED
1
405
-
-
Cca03g02710
411
SMART
sant
66
114
IPR001005
-
Cca03g02710
411
SMART
sant
13
63
IPR001005
-
Cca03g02710
411
MobiDBLite
consensus disorder prediction
123
144
-
-
Cca03g02710
411
Gene3D
-
11
67
-
-
Cca03g02710
411
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
9
65
IPR017930
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca03g02710
Cca-Chr3
48419135
48420540
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca03g02710
1
156
MYB Transcription Factor Family
AT4G01680
84.615
3.05e-95
283
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Cca03g02710
Myb_DNA-binding
1.9e-14
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca03g02710
K09422
-
gmx:100037467
700.664
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca03g02710
03
48419135
48420540
Cca02g01368
02
32141681
32143989
ECH
Cca02g01368
02
32141681
32143989
Cca03g02710
03
48419135
48420540
ECH
Cca03g02689
03
48174397
48176663
Cca03g02710
03
48419135
48420540
ECH
Cca03g02710
03
48419135
48420540
Cca03g02710
03
48419135
48420540
ECH
Cca03g02710
03
48419135
48420540
Cca02g01347
02
31964182
31966095
PCT
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