Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02706 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGTCAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCTTTAGATGAAGGGTTAGGCCACTCTTTCTGCTATGTGAGGCCATCTATTTTTGAATCTCCTGCCATTACCCCATCAAACTCTGAGAGGTTTACTGTTGATTCTAGCACCCTTGATTCCGAGACATTGAGTGGGTCGTTTAGGCATGAGAGCATTGAAGAGAGGCCTGGTAAGAATGTTCCGGAAACCACGTTCAAAACGATATCAGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCACTGCTTGCTAGTGATGTCTTGGAGCCTGCTGCATCATTTGAGGGAACCTCTTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGTTCTGGACCGCTGAATGGTTTCATGTCGGGACCTCTGGAGAGATTTTCCTCCGGTCCTTTGGATAAGGGTGGTGGTTTCATGTCTGGGCCAATTGAGAAGGGAGTTATGTCAGGTCCTCTTGATGCCACTGACAAGTCCAACTTTTCAGCGCCGCTTGCACGCAGCCGCCGAAGGCCGCACCTCCAACGCCTCATGAGAAGTGTCAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCGAAGCACTCCGTGGGTGGCAGTTGGGTGCAGCGGCTATTCCTCCATCCAGTGTCTCAACTGGCTTGGAATGCCAAAGAGGTGAAGTTTCGATCTGAAGTTTCTAGAAACTGTGCTGAAGTTGGATCGTCCGAATTGGAGTATACACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCTGGTGAAGATAGGGTCCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATCGGCATATATGATGGTTTCAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAGGATAATTCTGTTGATCCACCTAAATCTGATGTCCTTAAAAATGGAAATGATGTAATTGCTCTAGAATGTGGTAGGGAGGAAATGTCAGATGCTCTTACCATTTCTAATGAAGAAAGTTCTTGCTGTTTAGAAACTTCTTGTCCAGTAATGGTCAAGGATCAATCATCTAATAGTGAGATAGTGGAAGTAAATGTTGAACAGAAAAATTGTGGAAGTCCCAGTATTGTTCATACTGTTCCTGCATCTGTTCCAATTGGACAATTGAGTGGTCAAGGCAGAAGGAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAGGTGACCGAACAAGGCAAGGACTCTGTAGTTTCTGGGGAAATAACACAAGGGAAGCAGATGAGATTCTGGTCACCTGATGGTAAAGAGGATAGATCTAGACATCAGGATGAAGGTCCCACTACTTCAGGGGAAAATGGAGGTTCTGGGTTTAATTCGACCAACCAGGAGCCAATAGCTCCTCTTTCTGTTTCAGGACAAAGGCAGAATACAAGAAAGTCATTTATTGCTACAAAAATCAGAAAAATGTACAGGAAGCAGAAGTCCTTACGAAAGAAACTTTTTCCCTGGAGTTATGACTGGCATAGGGAGGAAACTTGTGTTGACAAGAAATTAGTGGAATCCTCAGGACCCATTAGAATATGCAAATCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGTCTCAGGCTCTTGAAAGAACAGAAGAGGCATACATGAAAATGGTGGAGAATAATCTGGACAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTTTTAGTGATGTTGATGAAGGATCAAGATGTTTATGTTATGAACCTTGGAGATAGTCGTGTAATTTTGGCTCAAGAACGGCCAAATGATCGTCATCCTAATCCATGTCTCATCAAAGATGACATGAGGCATAGGAACCGATCTAGAGAGTCATTAGTGGGCATGGAGTTGGATAGAATTTCAGAGGAGTCCCCAGTGCACACAATAAATAAGCATGTTCACAAGATAAACAAAAACAGAGAGATAAGCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCCACAGATCAcagcacaagtatcgaagagGAAGTTTTTAGAATAAGAGAAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTTACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGGTCAGTTGA 2274 0.4327 MGNGTSRVVGCLVPFNVKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVPETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFSSGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARSRRRPHLQRLMRSVSGPMRNTFSRTFSKHSVGGSWVQRLFLHPVSQLAWNAKEVKFRSEVSRNCAEVGSSELEYTHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNSVDPPKSDVLKNGNDVIALECGREEMSDALTISNEESSCCLETSCPVMVKDQSSNSEIVEVNVEQKNCGSPSIVHTVPASVPIGQLSGQGRRSVRLYELLQMESWNEQVTEQGKDSVVSGEITQGKQMRFWSPDGKEDRSRHQDEGPTTSGENGGSGFNSTNQEPIAPLSVSGQRQNTRKSFIATKIRKMYRKQKSLRKKLFPWSYDWHREETCVDKKLVESSGPIRICKSGVDHNAVLRAMSQALERTEEAYMKMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPCLIKDDMRHRNRSRESLVGMELDRISEESPVHTINKHVHKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIREEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRVS 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02706 757 ProSiteProfiles PPM-type phosphatase domain profile. 269 757 IPR001932 -
Cca03g02706 757 PANTHER PROTEIN PHOSPHATASE 2C 32 11 755 - -
Cca03g02706 757 SUPERFAMILY PP2C-like 280 754 IPR036457 -
Cca03g02706 757 MobiDBLite consensus disorder prediction 448 466 - -
Cca03g02706 757 PANTHER PROTEIN PHOSPHATASE 2C 11 755 IPR015655 GO:0004722|GO:0006470
Cca03g02706 757 SMART PP2C_4 271 756 IPR001932 -
Cca03g02706 757 MobiDBLite consensus disorder prediction 471 486 - -
Cca03g02706 757 Gene3D - 509 757 IPR036457 -
Cca03g02706 757 MobiDBLite consensus disorder prediction 448 518 - -
Cca03g02706 757 Pfam Protein phosphatase 2C 697 755 IPR001932 -
Cca03g02706 757 Pfam Protein phosphatase 2C 584 641 IPR001932 -
Cca03g02706 757 Gene3D - 244 407 IPR036457 -
Cca03g02706 757 Coils Coil 579 599 - -
Cca03g02706 757 CDD PP2Cc 578 754 IPR001932 -
Cca03g02706 757 MobiDBLite consensus disorder prediction 487 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02706 Cca-Chr3 48363279 48370956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02706 1 755 PP2C-type Phosphatase Gene Family AT2G46920 61.479 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02706 - - gmx:100786856 1430.23