Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02697 ATGACCACGCCCTATGGTCCGCCATCCAAACCCAAAGATAGGTTACATAATTCTCAACAAACTAGGGACGCGGAGATCAACTCCATCGTGATCAACACACCAAACAGTGAACACGCAACCATTGCGAATGCCCATGCTAGCTCCACGTCAAATGTAATTATGACCCAACAAGAAAATACCCGAAGAGTGTTAGAAGGCATTCATTCAGTGACTTCTAACTTTAAGCCTGAGTCCTTCGCAAACCAATTTATGACTAGGATAACTGTACCCGAGGCAGAAGTGCAGGCTTATGCAAAATTAATGCGCCAGCACCTAGACCCGAGCTCCACGAGCTCTTCCAGTGACGCTGCGATGCAAGGCAGAGTTATTGAAATAAATGCAGGTGATGCAACACCCTTCGGTATCTCAAATGCTTTCCCTAAGCTTAATAATGATGATATAGCCCTTATAGGTGCacctatttgcgatgaggaggttttagcagctgtgaaacgcatggTGAAGCATTCTCGATCTTCCCTTCTCGTTAGGGTTTACGCTtcctcaatcctcaatcctcaatcctcaatGGGGGTTCTCGTTCCGCTCTTCTTCTACGTCGCCGCATTCTTCTGCACCATTGCAGCTATCGCTTTGGCCGTTCTTCACATCTACAGGCACCTTCTCAATTACACTGAGCCCACCTACCAGCGCTTCATCGTTCGGATTATTTTCATGGTCCCGGTTTATGCACTAATGTCATTCTTGTCCCTTGTATTACCTGAGAGTTCAATCTATTTTAATTCTATCCGGGAAGTCTATGAAGCTTGGGTCATTTATAATTTCCTGTCACTGTGTCTGGCGTGGGTTGGTGGTCCTGGAGCAGTTGTAATAAGTGTGAGTGGTCGAGTTCTGAAGCCATCATTGTGTCTGATGACCTGTTGCTTTCCTCCTATACCGCTGGATGGGCGTTTCATACGTAAATGCAAGCAAGGATGTCTGCAGTTTGTGATTTTGAAGCCCATTTTAGTTGTTGTTACCCTTATACTTTATGCAAAGGGAAAGTATAAAGATGGAAATTTCAGTCCAAAGCAGTCATACTTGTATCTTACGATCATTTATACAATCTCATATACGATGGCTCTCTATGTTCTTGCTTTGTTTTATGTGGCATGCAAGGATTTACTTCAGCCATTCAATCCAGTTCCAAAGTTTATTATAATAAAATCTGTCGTGTTCCTGACCTATTGGCAGGGTGTGTTATTCTTCCTTGCTGCAAAGTCGGGATTCATTAAGGATGCTGATGAAGCTGCCCTACTTCAAAATTTTATCATTTGTGTTGAGATGCTTGTTGCTGCTGTAGGCCACTTTTATGCATTTCCATACAAAGAATATGCCGGTGCTAATATAGGTGGATCCCGTGGTTTGACAGCTAGCCTAGGGCATGCTTTGAAGTTAAATGATTTTTACCATGATACAGTCCACCAGTTTGCACCAACATATCATGAATATGTTCTCTACAATCACAGCGAAGGTGAGGAAGGAGCAAGGAAGTACAGGTCACGAACTTTTGTTCCAATGGGCCCAGAGATGGATTCTGTGAGAAAAAATAAGCATATGGTTGGAAACAAGTTAGATGACATACAGCTCTCAAGTTTGTCTTCTTCTTCTAACAGTAGCACTCCCTCAAATTCTGGTTCCACACCTGATGCTCCTGATGCTTCAAATTCTGATGCAATGAAATCTTCCTTGCTCGTGGAGATGTCTGATTCTGGTTCTTTACCATATGACTTGACCCTCATCGACTTGGATGTATCCAGTTACCCTGAAGAAGTTCCTGCGGCTGACAAAGCTGGTGCAAGGTGA 1845 0.4173 MTTPYGPPSKPKDRLHNSQQTRDAEINSIVINTPNSEHATIANAHASSTSNVIMTQQENTRRVLEGIHSVTSNFKPESFANQFMTRITVPEAEVQAYAKLMRQHLDPSSTSSSSDAAMQGRVIEINAGDATPFGISNAFPKLNNDDIALIGAPICDEEVLAAVKRMVKHSRSSLLVRVYASSILNPQSSMGVLVPLFFYVAAFFCTIAAIALAVLHIYRHLLNYTEPTYQRFIVRIIFMVPVYALMSFLSLVLPESSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVISVSGRVLKPSLCLMTCCFPPIPLDGRFIRKCKQGCLQFVILKPILVVVTLILYAKGKYKDGNFSPKQSYLYLTIIYTISYTMALYVLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFIKDADEAALLQNFIICVEMLVAAVGHFYAFPYKEYAGANIGGSRGLTASLGHALKLNDFYHDTVHQFAPTYHEYVLYNHSEGEEGARKYRSRTFVPMGPEMDSVRKNKHMVGNKLDDIQLSSLSSSSNSSTPSNSGSTPDAPDASNSDAMKSSLLVEMSDSGSLPYDLTLIDLDVSSYPEEVPAADKAGAR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02697 614 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 196 611 IPR005178 -
Cca03g02697 614 MobiDBLite consensus disorder prediction 544 579 - -
Cca03g02697 614 MobiDBLite consensus disorder prediction 1 20 - -
Cca03g02697 614 Pfam Organic solute transporter Ostalpha 199 458 IPR005178 -
Cca03g02697 614 PANTHER BNAA05G31380D PROTEIN 196 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02697 Cca-Chr3 48257802 48269386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02697 - - gmx:100780244 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02697 03 48257802 48269386 Cca02g01360 02 32060385 32064908 PCT