Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02641 ATGAATACAAGAGTTTTTGTTGTGGCTTGTTTGGCAGTGTTCTGTATCCTAGAGGTTTGTCAAGGAGGAGACCTCAGAAAGAAATTTTACAGGAAATCATGTCCTGATGCCGAGGAGATTGTAAGGACCAAAATCCAGACACATGTCTCTGCAAGGCCCGATTTGCCTGCCAAGTTGATTAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCGGTTTTGCTGGACTCCACTGCCACCAACACTGCAGAGAAGGATGCCATACCCAATTTATCTTTGTCTGGCTTTGATGTCATAGATGACATTAAAGACGCATTGGAGACAAAATGCCCTGGAATTGTATCTTGTGCTGACACACTAGCATTGGCAGCTAGGGACGCTGTTTCTGTCAAATTTAATCAGCCTACGTGGGAAGTGCTCACCGGTAGAAGAGATGGCACAGTATCCCTAAGTAGTGAAGCCCTAGCCAATCTGCCAGCACCTTTCTTCAACTTCACTCAGCTCAAACAAAGCTTTGCTAATAAAAAGCTTACTGTGCACGACCTGGTTGTGCTATCAGGAGCACACACAATTGGGATAGGTCATTGCAACTTGTTCAGTAACAGACTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCTTCTTTGGATCCCACTTATGCCAACTTTTTGAAGACAAAATGTCAGGGTCTGAGTGACACCACCACAACAGTAGAGATGGATCCAAACAGCTCAAACACCTTTGACAGTGACTATTACTCTATCCTTCTCCAGAACAAGGGTCTGTTCCAATCAGATGCAGCCCTTTTAACAACTAAGATTTCAAGAAACATTGTCAACGAATTGGTCAAACAAAACAAGTTCTTCACAGAGTTTGGGCAGTCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACAGGTTCGGCTGGGGAAATTAGGAAGAAGTGCTCTGTTGTCAACTCTTAA 975 0.4379 MNTRVFVVACLAVFCILEVCQGGDLRKKFYRKSCPDAEEIVRTKIQTHVSARPDLPAKLIRMHFHDCFVRGCDGSVLLDSTATNTAEKDAIPNLSLSGFDVIDDIKDALETKCPGIVSCADTLALAARDAVSVKFNQPTWEVLTGRRDGTVSLSSEALANLPAPFFNFTQLKQSFANKKLTVHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLDPTYANFLKTKCQGLSDTTTTVEMDPNSSNTFDSDYYSILLQNKGLFQSDAALLTTKISRNIVNELVKQNKFFTEFGQSMKRMGAIEVLTGSAGEIRKKCSVVNS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02641 324 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Cca03g02641 324 PANTHER PEROXIDASE 6 322 - -
Cca03g02641 324 PANTHER PEROXIDASE 25-RELATED 6 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 Gene3D - 28 323 - -
Cca03g02641 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cca03g02641 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca03g02641 324 Gene3D Peroxidase, domain 2 162 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02641 Cca-Chr3 47767160 47768853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02641 25 324 Peroxidase AT1G05260 57.096 1.40e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02641 K00430 - gmx:100775970 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02641 03 47767160 47768853 Cca03g02641 03 47767160 47768853 ECH
Cca03g02641 03 47767160 47768853 Cca02g01185 02 29429205 29430781 PCT
Cca02g00782 02 20892076 20895318 Cca03g02641 03 47767160 47768853 PCT