Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02630 | ATGGCTTCAAGATTCTGGACTCAGGGTGGAAGTGATTCCGAGGAGGAGGAGAGTGATTATGACGAGGAGATTGAAACCGCGGCAGGTGATTCTGCTAATCAAGCTGTTACAAGCAGGTACTTGCAGGACAATGCAAGTGACAGTGATGATTCTGATGGCCAAAAGCGCGTTGTGCGCTCGGCAAAAGACAAGCGGTTTGAGGAGATGGCGTCCACTGTCGACCAGATGAAGAATGCCATGAAGATCAATGACTGGGTGAGCTTGCAAGAGAGCTTTGACAAGATTAACAAGCAGCTTGAGAAGGTTATGCGTGTCACTGAGTCTGAGAAGGTGCCGAATCTTTACATCAAGGCACTTGTGATGTTGGAAGATTTCTTGGCTCAGGCTTTGGCTAATAAGGATGCCAAGAAGAAGATGAGTAGTAGCAATGCTAAGGCATTGAACTCCATGAAGCAGAAGCTGAAGAAGAATAATAAGCAGTATGAGGAGTTGATTAATAAGTGCAGGGAGAGTCCTGAgagtgaggaggagaaagaggaggaggaaagcgaggaagaatatgagagtgatgatgagATTATTGAGCCGGAGCAGCTTAGAAAACCTGAGGCAAAATCTGATTCGGAAGCCTCTCAGTATGATGATGAAAAGGCAGATGCCGGTGATGGTCCTTGGGACCAAAAGCTTAGCAAGAAGGACCGGCTTTTGGACAGACAGTTCATGAAAGACCCTAGCGAGATCACATGGGACACAGTTAACAAGAAGTTCAAAGAGGTTGTGGCTGCTAGGGGGAGGAAGGGAACTGGCAGATTTGAACAGGTTGAGCAGCTTACTTTCTTAACCAAGGTTGCTAAGACCCCTGCGCAGAAGCTGGAAATTCTTTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCAGGCCTTAATGGGCATATGCCCATAAATGTGTGGAAAAAATGTGTGCAAAACATGCTGGTGATTCTTGATATTCTAGTGCAGTACCAAAATATAGTGGTTGATGATTCGGTGGAACCAGATGAGAATGAAACTCAGAAAGGGCCTGACTATGATGGAACAATTCGGGTTTGGGGTAACTTAGTTGCTTTCTTAGAAAGAATTGATGTTGAGTTTTTCAAGAGCTTGCAGTGCATAGATCCTCATACACGGGACTATGTTGAGAGACTCAAGGATGAGCCCTTGTTTCTGGTTCTTGCTCAGAATGTCCAGGAATATCTTGAAAGAGTTGGGAATTTCAAAGCTGCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCATTTACTACAAACCACAAGAGGTTTATGATGCAATGAAAAAATTGTCTGAGCTGACAGAGGATGGAGAGCATGCAGGGGAGGCAAGTGAGGAGTCGAAGGGATTTGAGGAATCAAGAATTCCTACTGCATTTGTTGTTACCCCGGAGGTTGTGGCCAGGAAACCTACCTTCCCTGAGAATAGCAGGACCATAATGGATGTATTGGTATCATTGATATACAAGCATGGAGACGAGCGAACTAAAGCACGTGCAATGCTTTGTGATATATACCACCATGCTCTTCTCGATGAGTTCTCAGTAGCCCGGGATCTGCTGCTAATGAGCCATTTACAAGATAGTGTTCAGCATATGGACATTTCAACACAGATACTTTTTAACAGGGCCATGTCACAGTTAGGTTTATGTGCTTTTCGGGTTGGACTGATTTCGGAAGCACATGGTTGTCTTTCTGAACTGTACTCTGGTGGAAGGGTGAAAGAATTGCTGGCGCAAGGTGTGTCTCAAGGTCGTTATCATGAGAAGACTCCTGAACAGGAAAGGTTGGAAAGAAGACGTCAGATGCCATATCATATGCACATCAATCTTGAGCTCCTGGAGGCCGTACATCTTGTATCTGCTATGCTGCTGGAAGTTCCTAATATGGCAGCAAATATTCATGATGCAAAACGTAAGGTCATCAGTAAGACTTTCCGCCGCTTGCTTGAGGTAAGTGATAAACAAACATTCACTGGTCCACCAGAAAATGTCAGAGATCATGTTATGGCTGCCACAAGGTTTCTTATCAAGGGAGACTTCCAGAAGGCTTTTGACATTATTGTGTCTCTTGATGTATGGAAATTTGTGAGAAATCGAGACACTGTGCTTGAAATGCTGAAGGACAAAATCAAGGAGGAGGCATTGAGGACATACCTGTTTACCTTCTCTTCATCTTATGAATCCTTGAGCGTGGATCAGCTCACAAAATTTTTTGATCTCTCTGTGTCTCGCACTCATAGCATTGTCAGTAGGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGACCAGCCATCTGGGTGCATTATTTTCCAAGATGTTGAATACTCAAGGCTACAGGCATTGGCATTCCAGTTAACAGAGAAATTATCTATCCTTGCTGAGAGTAATGAAAGAGCAACGGAGGCAAGGATAGGTGGTGGTGGATTGGATTTGCCTCTAAGGCGGAGAGATGGCCAGGACTAtgctgctgctgctgctgGTAGTGGAACAGCCTCTTCAGGTGGTAGATGGCAAGACCTGTCCCATTCTCAGCCAAGGCAAAGCAGTGGGCGGGCAGGGTATGGTGGTGGAAGGCCAATGGCATTAGGCCAAGCAGCTGGTAGTGGCTATTCAAGGGATCGAAGAACAGGTGCTGGTTATCAAAGTGCACGGTACCAAGATGGTTCATATGGAGGTTCAGGGAGGACTCAAGGGGGTTCAGCATTGAGGGGACCCCAGGGTGATGTATCTACACGCATGGTTAGCCTTAAGGGTGTTCGTGCTTAA | 2817 | 0.4427 | MASRFWTQGGSDSEEEESDYDEEIETAAGDSANQAVTSRYLQDNASDSDDSDGQKRVVRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKCRESPESEEEKEEEESEEEYESDDEIIEPEQLRKPEAKSDSEASQYDDEKADAGDGPWDQKLSKKDRLLDRQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQYQNIVVDDSVEPDENETQKGPDYDGTIRVWGNLVAFLERIDVEFFKSLQCIDPHTRDYVERLKDEPLFLVLAQNVQEYLERVGNFKAASKVALRRVELIYYKPQEVYDAMKKLSELTEDGEHAGEASEESKGFEESRIPTAFVVTPEVVARKPTFPENSRTIMDVLVSLIYKHGDERTKARAMLCDIYHHALLDEFSVARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQGRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNMAANIHDAKRKVISKTFRRLLEVSDKQTFTGPPENVRDHVMAATRFLIKGDFQKAFDIIVSLDVWKFVRNRDTVLEMLKDKIKEEALRTYLFTFSSSYESLSVDQLTKFFDLSVSRTHSIVSRMMINEELHASWDQPSGCIIFQDVEYSRLQALAFQLTEKLSILAESNERATEARIGGGGLDLPLRRRDGQDYAAAAAGSGTASSGGRWQDLSHSQPRQSSGRAGYGGGRPMALGQAAGSGYSRDRRTGAGYQSARYQDGSYGGSGRTQGGSALRGPQGDVSTRMVSLKGVRA | 938 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02630 | 938 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 43 | 652 | IPR008905 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Cca03g02630 | 938 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C | 1 | 911 | - | - | |
Cca03g02630 | 938 | SMART | PINT_4 | 721 | 809 | IPR000717 | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 175 | 193 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 45 | 64 | - | - | |
Cca03g02630 | 938 | Hamap | Eukaryotic translation initiation factor 3 subunit C [EIF3C]. | 2 | 873 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Cca03g02630 | 938 | Gene3D | - | 727 | 795 | IPR036388 | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 848 | 867 | - | - | |
Cca03g02630 | 938 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 721 | 809 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 12 | 26 | - | - | |
Cca03g02630 | 938 | SUPERFAMILY | "Winged helix" DNA-binding domain | 716 | 791 | IPR036390 | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 155 | 174 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 135 | 154 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 194 | 229 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 134 | 229 | - | - | |
Cca03g02630 | 938 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 911 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Cca03g02630 | 938 | Coils | Coil | 144 | 171 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 899 | 921 | - | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 838 | 938 | - | - | |
Cca03g02630 | 938 | Pfam | PCI domain | 660 | 788 | IPR000717 | - | |
Cca03g02630 | 938 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
Cca03g02630 | 938 | ProSiteProfiles | PCI domain profile. | 620 | 792 | IPR000717 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g02630 | Cca-Chr3 | 47668496 | 47673456 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02630 | 1 | 938 | Eukaryotic Initiation Factors Gene Family | AT3G56150 | 67.891 | 0.0 | 1204 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02630 | K03252 | - | gmx:100779751 | 1604.34 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g02630 | 03 | 47668496 | 47673456 | Cca03g02630 | 03 | 47668496 | 47673456 | ECH |