Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02619 ATGGGTTCCCTCCCGCAGGCGCACGTAGTAGAGGACTGCATGGGCATCCTCCAACTCTATAGCGACGGTTCCATTCACCGTTCCAACCAAATAGAATTCAAAGTTTCAGCCACCAAAGACAACACCGTAACCTTCAAGGAATACCTATTCCACAAAAGATTCAACCTTTCACTGCGCTTCTACAAGCcccaaaaccaaacccaaacccaaacccaaaAGCTCCCCCTCCTCATCTTCCTCCACGGTGGAGGCTTCTGCTTCGGTTCGCGCACGTGGCCCCATATTCACAACTGTTGCATGCGCCTCGCCTCGGGGCTCCGCGCCGCGGTCCTCTCGCCGGACTACCGCCTGGCGCCCGAGCATCGCCTTCCCGCGGCGCTGGACGACGCCCTGGAGGCGGTCAGGTGGCTCCAGAGGCAGGGGCTGAGCCACGGTGGGGACGCCTGCTTCAGTGCCAACGTTGACTTTGACCGCGTCTTCATCGTGGGTGACTCCTCTGGCGGGAACATTGCGCACCACCTCGCGGTCCGCTTCGGTTCCGGTTCGATTCAGATGGACCCGGTTCGTGTACGAGGTTACGTGCTGTTCGCGCCGTTTTTCGGCGGGGAGGTTCGGACCAAGTCAGAGGAAGGTCCACCAGAGCACATGTTGAACCTTGAGTTATTGGACAAATTTTGGAGGCTGTCAATGCCTGTTGGAGAGAGCAGAGACCACCCATTGGTGAATCCATTCGGACCTGGAAGCCCAAATCTTGAAGAAGTGAAGCTTGATCCTATTTTGGTGATAATAGGTGGCAATGAATTACTTAAGGATAGGGCAGAAGATTATGTTACAAGGTTGAAACAACTAGGCAAGGACATTAAATACGTTGAGTTTGAGGGATGCGAGCATGGGTTTTTCACTCATGATTCATACTCTTCACAAGTTGCAGAAGAGGTCATCCAAACCCTTAAACGGTTCATGCTGGAAACTTCTAGTTAG 981 0.5209 MGSLPQAHVVEDCMGILQLYSDGSIHRSNQIEFKVSATKDNTVTFKEYLFHKRFNLSLRFYKPQNQTQTQTQKLPLLIFLHGGGFCFGSRTWPHIHNCCMRLASGLRAAVLSPDYRLAPEHRLPAALDDALEAVRWLQRQGLSHGGDACFSANVDFDRVFIVGDSSGGNIAHHLAVRFGSGSIQMDPVRVRGYVLFAPFFGGEVRTKSEEGPPEHMLNLELLDKFWRLSMPVGESRDHPLVNPFGPGSPNLEEVKLDPILVIIGGNELLKDRAEDYVTRLKQLGKDIKYVEFEGCEHGFFTHDSYSSQVAEEVIQTLKRFMLETSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02619 326 Gene3D alpha/beta hydrolase 10 322 IPR029058 -
Cca03g02619 326 PANTHER CARBOXYLESTERASE 15-RELATED 6 322 - -
Cca03g02619 326 Coils Coil 266 286 - -
Cca03g02619 326 SUPERFAMILY alpha/beta-Hydrolases 8 319 IPR029058 -
Cca03g02619 326 PANTHER ARYLACETAMIDE DEACETYLASE 6 322 - -
Cca03g02619 326 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02619 Cca-Chr3 47555755 47558929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02619 9 306 Carbohydrate Esterase AT5G16080 34.437 9.05e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02619 - - gmx:100783849 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02619 03 47555755 47558929 Cca03g02619 03 47555755 47558929 ECH
Cca02g01181 02 29368138 29370514 Cca03g02619 03 47555755 47558929 ECH
Cca03g02619 03 47555755 47558929 Cca02g00686 02 16067333 16076571 PCT