Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02574 ATGGTTGATAAGCAACCCCACTTGAACGGTGGCTATTACGGTCCCGCCATTCCCCCTGCGGAGCAACCACGCTACCGCCACAACCATGGAAGAAGCTGCTGTTGCTGCCTCTTCGGAATCTTCTGGAAGATTCTCGTTACCCTCATCGTCCTCGTTGGCCTCGCAATCCTCATCTTCTGGCTCGTGGTTCAACCCCGTTCCTTCAAGTTCTATGTAACGGAAGCAGAGCTAACTCAGTTTGAGTATGATACCAACAACAACACCCTTCACTACAACATGGTGCTCAACTTCACCGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTAGAGGCATTAGCGTTCTACGAGGACACCAGGAAGATGAAGAGGCTCCCCACCACCGTGACAACAACACACGAACACCACCGCACTGGCGTCGCCGCCGCCAATTCGGTAATGCCAACAATGGCCAACTACAAGAGCTACTCCAAGAAGCTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTCCCTTGGTCCCCCACCCCAACGACCAACGCACCGCGGCCTCTTCTCGGAGATCTCCACTGCAACATCGTCGAAGCCCACGCGTGGAGCCACAATGCGAGGCTCACATGCGTAGAGCGCACGCTGCACCAGCTTATGCCCTTCGTCAGGAACTTCGAGACTCCCTCGTCGACCAAGCAGATGAATTAGGGAAGGAAAAGGATGCTGCCACCAAGACAAATTAA 798 0.4825 MVDKQPHLNGGYYGPAIPPAEQPRYRHNHGRSCCCCLFGIFWKILVTLIVLVGLAILIFWLVVQPRSFKFYVTEAELTQFEYDTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDTRKMKRLPTTVTTTHEHHRTGVAAANSVMPTMANYKSYSKKLFXXXXXXXXXXXXXXXXXXXXXXXXXXXFPLVPHPNDQRTAASSRRSPLQHRRSPRVEPQCEAHMRRAHAAPAYALRQELRDSLVDQADELGKEKDAATKTN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02574 265 MobiDBLite consensus disorder prediction 193 224 - -
Cca03g02574 265 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 131 - -
Cca03g02574 265 MobiDBLite consensus disorder prediction 246 265 - -
Cca03g02574 265 PANTHER OS05G0367900 PROTEIN 18 131 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02574 Cca-Chr3 47045399 47048120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02574 62 123 SNARE and Associated Proteins AT1G32270 40.323 3.56e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02574 - - ccaj:109813970 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02574 03 47045399 47048120 Cca03g02574 03 47045399 47048120 ECH
Cca03g02574 03 47045399 47048120 Cca02g00625 02 13968068 13969036 PCT