Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02507 ATGAACTCGCGCAACCAACTCTTTTCCCTCCTCTCTCTTTTCTTAATCCTATGTCTCTCAGGCCAAAGGGTGATGCAAGCAGAGGCTCGCcatcatcatcatcaccatcaccatcaCCTAACAAAATTGTTTGTTTTCGGAGACTCCTATGCCGACACAGGCAACGTTCAGAAAAGTGTATCAACTTCATGGAAAGACCCTTATGGCATCACCTTTCCCGGCAAGCCCGCCGGAAGATTCTCCGACGGTAGAGTCCTCACCGATTTCATTGCAAAGCATTTGAAAGTGAAATCGCCAATCCCATACAGATTGAGGAAAGTGATACCGAATCATCTGAAATATGGGATGAACTTTGCGTTTGGGGGCAGTGGTGTGTTTAAGACGTCGTTTCCACTCCCAAACATGACAACCCAGATCGATTTCTTTCAGCAACTCATCGAAAAAAGAGTGTACAGTGCCTTAGATCTCACAAAATCAGTGGCCCTCGTCTCTGTCGCTGGAAATGACTACAGTTATTACTTGGCAACAAATGGATCTGCTGAGGGTTTGCCAGCTTACGTGGGCGCAGTGGTGAGTCAGACAGTGAAGAATCTGATTCGCATAAAAGGGTTGGGAGTGAAGAAAATAGTGGTGGGTGGTCTACAACCCCTAGGATGCCTTCCCTCGATCACAGTGGCAACCTCGTACGAACGTTGCAACGAGACCACAAACGCCCTCGTACTTCTCCACAACTCTCTATTGAGCGAAGCAGTGAGCAAACTGAACAAACGAAGCATGGAGCCATCCACCTTCCTAGTCCTCAACCTCTACGAGAGCTTCTTGTCGGTGCTGAAACAGAAACAGAAAGACCCTTCGACCCACCACATTGGCAACAAGTTGAAACCGTGCTGCGTGGGAGTGAGCAGCGGGTACACGTGTGGGGACGTGGACAAGAACAAGGTTAAGATGTATAGGGTTTGTGATGACCCTAAATCTGCTTTCTTTTGGGACCTTGTGCACCCCACGCAGGCTGGATGGCATGCAGTCTATAACAAGTTGCGAACCATGAACACTCTTCAACACATTCATTTCGACCATGCCTAA 1083 0.4709 MNSRNQLFSLLSLFLILCLSGQRVMQAEARHHHHHHHHHLTKLFVFGDSYADTGNVQKSVSTSWKDPYGITFPGKPAGRFSDGRVLTDFIAKHLKVKSPIPYRLRKVIPNHLKYGMNFAFGGSGVFKTSFPLPNMTTQIDFFQQLIEKRVYSALDLTKSVALVSVAGNDYSYYLATNGSAEGLPAYVGAVVSQTVKNLIRIKGLGVKKIVVGGLQPLGCLPSITVATSYERCNETTNALVLLHNSLLSEAVSKLNKRSMEPSTFLVLNLYESFLSVLKQKQKDPSTHHIGNKLKPCCVGVSSGYTCGDVDKNKVKMYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNTLQHIHFDHA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02507 360 CDD SGNH_plant_lipase_like 43 346 IPR035669 -
Cca03g02507 360 Gene3D SGNH hydrolase 27 353 IPR036514 -
Cca03g02507 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 356 - -
Cca03g02507 360 SUPERFAMILY SGNH hydrolase 42 346 - -
Cca03g02507 360 Pfam GDSL-like Lipase/Acylhydrolase 43 345 IPR001087 GO:0016788
Cca03g02507 360 PANTHER OSJNBB0059K02.9 PROTEIN 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02507 Cca-Chr3 46346672 46349723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02507 4 342 Pollen Coat Proteome AT1G75930 26.667 1.28e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02507 - - gmx:100788092 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02507 03 46346672 46349723 Cca02g00540 02 11834894 11838858 PCT