Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02504 ATGAATCATACAATAAAAATGTTACACAATTGGCTACTATTACTTCTACTACTCGTCTTCTGTCATTATCATTTACACGTTCAAGGATCAGATCAAAATGAAAGAAAGCCATATATTGTATACATGGGAGAACTACCAGTGGCTAGACCCTATGCTGTGGAAAGCCACCACCACAACATGCTAGAGACTGCGATTGGAAACAAGCAATTAGCCAGAGAGTCCAAAATATATAGTTATGGAAAGAGCTTCAACGGATTCGCTGCACGACTTTTGCCACATGAGGCAGAGATGCTGCGAGAGGAAGACAGTGTGGTGTCTGTGTTTCCAAATACACTCCGCAAATTACACACAACAAGGTCGTGGGATTTTCTAGGAATGCCCCAAAACGTGAAGAGAAACTCGAACGTAGAAAGTCATATCATTGTGGGCGTGTTGGATACAGGTATTTGGGTTGATTGCCCCAGTTTCAACGATAAGGGGTATGGACCTCCCCCACGAAGATGGAAGGGCAAATGTGTAACGGGAGCAAACTTTACTGGCTGCAACAACAAGGTGATTGGAGCAAAATACTTCAATCTGGAAGATAGCAACCCAGCTTCGGACAACCTTAGTCCGGCGGACGACATGGGTCACGGCACTCACAcggcgtcgacggcggcgggcgcggcggTGAAGGACGCGAGTCTCTACGGCATCGGCAAAGGCACGGCGAGGGGCGGGGTCCCATCGGCGCGCATTGCCATGTACAAGGTATGCTGGAGCGTGGGCTGCAGCGACATGGACATGCTCGCCGGATTCGACGAGGCCATCGCCGACGGCGTTAACTTCTTGTCGGTCTCCATCGGTGGCCCCTCACGTGACTTCTTCTCCGACCCGATTGCCATCGGCTCATTCCACGCCATGACCAGAGGGATTCTCACTTCTTGCTCCGCCGGCAACAGTGGCCCTCGCCCCATGTCGGTCGAGAACTCCGCTCCCTGGATTTTGACGGTGGCGGCTTCCGCCCTTGATCGCCAGTTCACCACACTCGTTGCCTTTGGTGATGGAAACAACATAACTGGACTTTCTATTAATACCTTTTCCCCGGAGAAAAAGATGTATCCATTGACTAGTGGACTCCTTGCGGCGAACAATAGTGGAGACGGCTTTGGCAGTGCTAGTGGTTGTGACTATGGGACTCTAAGGAAGGACAGAGTGAAGGGGAGGATAGTGTACTGCGTTGGGGGTACTGGGAGTCAGGACTTGACCATCAAAGAATTAGGAGGAGCAGGGGCCATCATAGGTGTTGAAGACCCAATAGACGCCTCCTACACCACCGTTATTCCAGGGGCCTATGTTGAAGCCGACACTGTCGGCAAAATCATCGATCGCTACATCAATTCCACAAAAAAGAATGCTAGAGCGGTTATTCACAAGACAACAACTGCAGAAGTCCCTGCTCCATATCTTGCTTCTTTTTCATCGAGAGGTCCTCAAGTCATCACCCCAAATATCCTCAAGCCTGATTTGGTTGCCCCTGGAGTGGACATTCTAGCTGCTTATTCCAAACTGGCAACACTGACAGGGTACCATGAAGACAACCGTTACGACGTATTTAACATAATATCAGGAACATCTATGGCATGCCCACATGCTGCTGCAACCGCTGCCTATGTCAAATCCTTCCACCCTGATTGGACTCCTGCTGCAATTAAATCTGCTATCATGACCACTGCCACTCCTCTCAAAATCGGGGACAATTTAACGGAACTGGGATCTGGGTCAGGACAGCTTGACCCTGTGAAAGCATTGCATCCTGGCCTGGTTTACGACATTAGAGTCAACTCCTATATTGCCTTCCTTTGCAAGTCAGGCTTCAACAGCACCAACATTGGTATACTAATAGGCAGCAAAAATTTCAGTTGCTCAAGCATGAAGACACCGCCAGGCTCTGATGGAATCAACTACCCCAGCATGCATATCCAGCTATTCGATTCCAGTTCTAGAATTTCCGCAGTTTTTCATCGGACTGTGACCAACGTAGGATCTAGGAATTCAACTTACAAGGCTAAAGTTACGGCTCCCAAGGGTCTCTCCGTGAAGGTCATCCCAAATACGTTGAAGTTTAGGCAGTTGCACCAAAAATTGTCATTTAAGGTTGTCATGAAGGGACCTCCAATGCCGAAGGATACTCATATATTAACTGCATCACTTGAATGGAATGACTCTAAACACACAGTCAGAAGTCCAATACTTATCTTTAAGCCGTTGTATTGA 2256 0.4756 MNHTIKMLHNWLLLLLLLVFCHYHLHVQGSDQNERKPYIVYMGELPVARPYAVESHHHNMLETAIGNKQLARESKIYSYGKSFNGFAARLLPHEAEMLREEDSVVSVFPNTLRKLHTTRSWDFLGMPQNVKRNSNVESHIIVGVLDTGIWVDCPSFNDKGYGPPPRRWKGKCVTGANFTGCNNKVIGAKYFNLEDSNPASDNLSPADDMGHGTHTASTAAGAAVKDASLYGIGKGTARGGVPSARIAMYKVCWSVGCSDMDMLAGFDEAIADGVNFLSVSIGGPSRDFFSDPIAIGSFHAMTRGILTSCSAGNSGPRPMSVENSAPWILTVAASALDRQFTTLVAFGDGNNITGLSINTFSPEKKMYPLTSGLLAANNSGDGFGSASGCDYGTLRKDRVKGRIVYCVGGTGSQDLTIKELGGAGAIIGVEDPIDASYTTVIPGAYVEADTVGKIIDRYINSTKKNARAVIHKTTTAEVPAPYLASFSSRGPQVITPNILKPDLVAPGVDILAAYSKLATLTGYHEDNRYDVFNIISGTSMACPHAAATAAYVKSFHPDWTPAAIKSAIMTTATPLKIGDNLTELGSGSGQLDPVKALHPGLVYDIRVNSYIAFLCKSGFNSTNIGILIGSKNFSCSSMKTPPGSDGINYPSMHIQLFDSSSRISAVFHRTVTNVGSRNSTYKAKVTAPKGLSVKVIPNTLKFRQLHQKLSFKVVMKGPPMPKDTHILTASLEWNDSKHTVRSPILIFKPLY 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02504 751 CDD PA_subtilisin_like 347 464 - -
Cca03g02504 751 Gene3D - 614 748 - -
Cca03g02504 751 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Cca03g02504 751 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Cca03g02504 751 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Cca03g02504 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Cca03g02504 751 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 152 IPR023827 -
Cca03g02504 751 PANTHER CUCUMISIN PROTEIN 26 748 - -
Cca03g02504 751 Pfam Peptidase inhibitor I9 38 116 IPR010259 -
Cca03g02504 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 748 IPR045051 -
Cca03g02504 751 Pfam Subtilase family 138 587 IPR000209 GO:0006508|GO:0008236
Cca03g02504 751 ProSiteProfiles Serine proteases, subtilase domain profile. 120 597 - -
Cca03g02504 751 SUPERFAMILY Subtilisin-like 115 601 IPR036852 GO:0004252|GO:0006508
Cca03g02504 751 Pfam Fibronectin type-III domain 647 746 IPR041469 -
Cca03g02504 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Cca03g02504 751 CDD Peptidases_S8_3 114 573 IPR034197 -
Cca03g02504 751 Gene3D Peptidase S8/S53 domain 140 610 IPR036852 GO:0004252|GO:0006508
Cca03g02504 751 Gene3D - 337 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02504 Cca-Chr3 46315713 46319652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02504 7 571 Subtilisin-like Serine Gene Family AT5G03620 60.312 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02504 - - gmx:100793716 1221.45