Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02503 ATGGATGCGGAATCAGAGAAGCGCTCTGCATCCACCTCCTATTCTACTTCTCCGTCTTCCTCTTACTCGTCTTCGTGCGACCGTTTGGATCGGCTCCTCGACACGGAGGAGATTGAAGCGGCCGAGACTCTGGCGCACTTGGCAATGCGCGAGACTCACTCCGCCGATAAATGGTGCAACCAACCCCGAGTCACGCGCGACTCACCGACTCAACACTCGGAATCGGATCTCTCGCACTCTCCCCTTGGCCCTGGGGGCCAAGCTATTGCAGGTCAGCAGCTAGATGAAAAAGTATCCACTACTACGTCTGCAGAAACAGAACAACGTATTCAGCAGGATGACTGCTCGAGAGACATGAAGGTGGAGCAGGATGCTTATTTATTACCTAACTCAAGTAACTCTTTGGTTAGATGCAGCAAGTCAAGGCGAAATTTAACCGAGGAAGAAAAAGAAGCAAGGAGGGTACGCAGGATATTGGCAAATAGAGAGTCAGCTAGGCAGACAATTCGCCGTAGGCAGGCTCTGTGTGAGGAGTTAAACAGAAAAGCTGCCACTTTGGTGGTGGAGAATCAAAACCTGAAGAGGGAGAAAGAGTTGGCTTTGAAAGAGTATCAGTCGTTGGAGACTACAAATAAGCACTTAAAGGCACAAATAGCCATGTCAATAAATACTGAAGTGGAGAAAGCTCCTGTTGAACCTGAGTCATCTGTGGCTAAGGTAACACCTTTCTCTGGTAATGGTCCATGGTTCCTTTATAACCATTTTCCAGTTCCACAGATATTTTGGCCTTCCATCCTTGAGTCTTCCAATCCAGTTCATTTACAAAATGCACCATTTAATTATATCGCCATTCCATCCAATGCTAATGTTCCATGTTCTTCCGTGTCTGAATCATGTCGCAAGCAAAATAGCCTTATAAATGATAATCGAACACAAAATCCATGTTACGTGTTTCCATGTCCTTGGTTATTCCCTCTTCCACAGTTTGGAAATGGACAATCATCATCGCCTTCCAGTAGCCTGAAAGATAAACAAGATAATCTTTCTCAAGGTAACCAATGTAGTTCTAGTTCATCTTTGAATACACTGGCAAATGTGGATTATCAAGCAGCTCTACCTATCAAACTTACAACAGAAGCTTCTGGCTGGGCAGAGCCCAGACCTGTCAATGACCATGGCTGTGCCACTCCAATATTTTCTTTAGATGGAGAACATGAATTTCAATTACATTCTGCTCCTGACAACAAAGTATCTTCGACAACTTATATTGCAACTTCTTCACTGGAAAAGAAACAAGAGCAGCAGTTCATTTGCCCGGGGAAAAATCTAGCGGATGTAGTTGCTGCAGCAGAAGCAAGAAAGAGGAGAAAGGAATTAACAAAGCAGAAAAGCATCCATAACCGCCAGTCCCGGATGCACTGTTGA 1425 0.4505 MDAESEKRSASTSYSTSPSSSYSSSCDRLDRLLDTEEIEAAETLAHLAMRETHSADKWCNQPRVTRDSPTQHSESDLSHSPLGPGGQAIAGQQLDEKVSTTTSAETEQRIQQDDCSRDMKVEQDAYLLPNSSNSLVRCSKSRRNLTEEEKEARRVRRILANRESARQTIRRRQALCEELNRKAATLVVENQNLKREKELALKEYQSLETTNKHLKAQIAMSINTEVEKAPVEPESSVAKVTPFSGNGPWFLYNHFPVPQIFWPSILESSNPVHLQNAPFNYIAIPSNANVPCSSVSESCRKQNSLINDNRTQNPCYVFPCPWLFPLPQFGNGQSSSPSSSLKDKQDNLSQGNQCSSSSSLNTLANVDYQAALPIKLTTEASGWAEPRPVNDHGCATPIFSLDGEHEFQLHSAPDNKVSSTTYIATSSLEKKQEQQFICPGKNLADVVAAAEARKRRKELTKQKSIHNRQSRMHC 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02503 474 Pfam bZIP transcription factor 149 211 IPR004827 GO:0003700|GO:0006355
Cca03g02503 474 PANTHER G-BOX-BINDING FACTOR 3-RELATED 5 469 IPR044827 GO:0003700|GO:0006355|GO:0043565
Cca03g02503 474 CDD bZIP_plant_GBF1 154 205 IPR045314 GO:0003700|GO:0006355
Cca03g02503 474 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 5 469 - -
Cca03g02503 474 Coils Coil 449 469 - -
Cca03g02503 474 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 151 214 IPR004827 GO:0003700|GO:0006355
Cca03g02503 474 MobiDBLite consensus disorder prediction 58 116 - -
Cca03g02503 474 MobiDBLite consensus disorder prediction 1 26 - -
Cca03g02503 474 MobiDBLite consensus disorder prediction 331 357 - -
Cca03g02503 474 SUPERFAMILY Leucine zipper domain 153 208 IPR046347 GO:0003700|GO:0006355
Cca03g02503 474 MobiDBLite consensus disorder prediction 8 26 - -
Cca03g02503 474 SMART brlzneu 149 213 IPR004827 GO:0003700|GO:0006355
Cca03g02503 474 Coils Coil 162 217 - -
Cca03g02503 474 MobiDBLite consensus disorder prediction 93 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02503 129 474 bZIP Transcription Factor Family AT1G19490 38.375 8.37e-57 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca03g02503 bZIP_1 5.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02503 - - gmx:778152 642.114