Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02498 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAGGGAGGAGCGAAATACAAGGAAAGCTCCTGGGATTTTTCAGTCCAATTCTGAGTGTAGCACGTCCGCAAAAACTCAGAAACTTTCGCTGTTGAAACTGGGATACAAGGACGATCTAGATGATGATATTAATAAGCTGTTTGAGTCGATTGCTCTTAAATCTTCATCAAGGGATTTGGGCCTTTTACAAGATGGTGCAAGTTCTAAGCTGAAAAGTGCATTAAAAAAGCCAATTACAATGGGTGTTCCTCGGTCCCCAAGAGTTGGGACTTCTGAGCCTGTTAATTTGAAGCAAGCATTAAGAGACCATTGTATATCTAAGGCATCAGAAATGGCCGCTCTGAAACGATTATCAAAGTCAACAGCTTCTCCAAGAATATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCAGTCGTTCTGGGCCTTCCTATGTTGAGACCAAGGAGCGTCAAATCGAAATATCTGTAGTGCCCGAAAAAAGTAAGTCTCTTTCCTTGGAGAAAACCTCTCAATCCTATCAAACTGCTGAAATCACATCATCGACCCGGAACATTCATTCGTCTCGGGGAATTGCTGTTGCAATGGCTCAGTATGATTCTGGCACTTCATCAATTCAAAGTGATTTGGCATGCTCATCAAGTAAAGTTGGGATTCAATCGCAGCGAGTGGTACCTGTTGAAACAGAAGAAAAAGCATCTGCCTCTTCTCCCTCCCTTTGTAATACATTTGGAAGCAAATCAGAGGTGCCCAAAAATGATTCTTCCTCTAAAAAGTTGGGAAATAAATCATTGGCGTCAAATACCGGGAGGAAAGGTAGGTTGCAAATAGTATCTTCTTCATCTACTTCTGCAAATGGCAACAGAGTTAGCAAACTGCCACGCCATGCCTCCCGCACAGTTAAATCGGTTATCAGGAACAAGAATCTGAGTAAGAAGAAACTAAAGGAGGATTCGGATTCGGCTTTATGTGGTCCTACACCCAATGAAGTTAATAAGCCAGCTCCTGGTACACCTCGATTGGTTTGTGAGAGATGTAGGTGTGCTTTAGAAAATACACGTGCAGAAAAAACCCAAGGTGTTGTGGCCTCGGACTCTACCGGTCCTGGAAATGGAGTAAACTTAAGTAATGTGAAATCTGGTTCAAATAAACCTGGTTTGGTGTCAAATGGCGATAATAAAAGCAAAACAGTTGCAAAAGTGAAGAACCCCAAGTTGAAGGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTTAGTGGCTCAAGTCGTAGCACTAGGCCCCACATGTCAAAGGATGTCAGGTGGGCAGCCATACGACATGCTCAAATGCAGCATGGAATCTTGGGCTTGAGAAACTTCAATCTTTTAAAGAAACTTGGTTGTGGAGACATTGGGACTGTGTATCTTGCGGAACTGATTGGCACAAGTTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGAAAGAAGAAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTGGATCATCCATTTCTTCCCACGTTGTATGTGCAATTTACGTCAGATAATCTATCATGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTCTCGGAGCCAGCAGCAAGATTTTATGTTGCTGAAGTCCTTCTAGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTCTCCCTAAGGTGTGCTGTTAACCCAACACTTCTGAAATCATCTTCTGATATTGACCCTGCAAAAATTTCTGGTCTAAGTGCACAATCAAGTTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTCCTACCCACCACTGCAAAAGCAAGGAAATTAAAAGTTGATCTTGCTACCCAGGTCAGATCATTGCCACAGCTTGTGGCCGAACCCACTGATGCGAGATCTAACTCATTTGTTGGCACACATGAATACCTGGCTCCGGAGATCATCAAAGAAGAGGGACATGGAGCTGCTGTTGACTGGTGGACATTTGGTGTTTTTCTCTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCAAACAATGAAGAAACATTGGCGAATGTAGTGTTGCAGAGTCTTAGATTCCCTGACAGCCCATTGGTTAGTTTCCAAGCCAAGGATTTGATTAGAGGGTTGTTGGTTAAAGACCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCCGCCGAGATTAAACAGCATCCCTTCTTCGATGGGCTTAACTGGGCCTTAATTCGTTGCGCTGTCCCTCCAGAACTTCCAGACTTGTATGATTTTGGAGTTTCAGACATGATGAACTTACAGGGCAATGGTGCTAAGTACTTAGAGTATAAAGCAGGAGAGCATGTAGAATTCGAGTTGTTTTAG 2616 0.427 MGSFSGTCEIVEAREERNTRKAPGIFQSNSECSTSAKTQKLSLLKLGYKDDLDDDINKLFESIALKSSSRDLGLLQDGASSKLKSALKKPITMGVPRSPRVGTSEPVNLKQALRDHCISKASEMAALKRLSKSTASPRISEVGKIQTLYNSVVAETSRSGPSYVETKERQIEISVVPEKSKSLSLEKTSQSYQTAEITSSTRNIHSSRGIAVAMAQYDSGTSSIQSDLACSSSKVGIQSQRVVPVETEEKASASSPSLCNTFGSKSEVPKNDSSSKKLGNKSLASNTGRKGRLQIVSSSSTSANGNRVSKLPRHASRTVKSVIRNKNLSKKKLKEDSDSALCGPTPNEVNKPAPGTPRLVCERCRCALENTRAEKTQGVVASDSTGPGNGVNLSNVKSGSNKPGLVSNGDNKSKTVAKVKNPKLKEQLEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWAAIRHAQMQHGILGLRNFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPTLLKSSSDIDPAKISGLSAQSSCIEPFCIEPSCQVPCFSPRFLPTTAKARKLKVDLATQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDSPLVSFQAKDLIRGLLVKDPENRLGSEKGAAEIKQHPFFDGLNWALIRCAVPPELPDLYDFGVSDMMNLQGNGAKYLEYKAGEHVEFELF 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02498 871 SUPERFAMILY Protein kinase-like (PK-like) 462 844 IPR011009 -
Cca03g02498 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Cca03g02498 871 SMART serkin_6 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02498 871 CDD STKc_phototropin_like 488 843 - -
Cca03g02498 871 Gene3D Phosphorylase Kinase; domain 1 486 567 - -
Cca03g02498 871 MobiDBLite consensus disorder prediction 376 465 - -
Cca03g02498 871 PANTHER FLIPPASE KINASE 1-RELATED 1 871 - -
Cca03g02498 871 ProSiteProfiles Protein kinase domain profile. 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02498 871 MobiDBLite consensus disorder prediction 376 415 - -
Cca03g02498 871 MobiDBLite consensus disorder prediction 246 357 - -
Cca03g02498 871 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 871 - -
Cca03g02498 871 MobiDBLite consensus disorder prediction 426 461 - -
Cca03g02498 871 MobiDBLite consensus disorder prediction 250 311 - -
Cca03g02498 871 Gene3D Transferase(Phosphotransferase) domain 1 568 636 - -
Cca03g02498 871 MobiDBLite consensus disorder prediction 313 327 - -
Cca03g02498 871 Pfam Protein kinase domain 489 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02498 871 Pfam Protein kinase domain 717 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02498 871 Gene3D Transferase(Phosphotransferase) domain 1 713 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02498 Cca-Chr3 46260916 46266353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02498 1 871 AGC Kinase Gene Family AT2G36350 50.984 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca03g02498 Pkinase 9.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02498 - K08286 gmx:100792120 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02498 03 46260916 46266353 Cca02g00529 02 11356588 11361326 PCT