LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca03g02476	ATGTCCGGAATACACTGTTTCAATAGTCCAAGAGGCACAGCTGTACATTCCAGGATACTTCATATTTATTCCAACAGAATATTGTTCGAACGCAGAAGGAACATCTCTCTGAGTGTCTACTATAGCAGCTTGTTTTCTTTCCAGCGAGGAAACAGACATCTTCTCAACAACATCCAAAGGCGCAGACCACCTCAATCCCAACAAGTTGGTACCTATATTAGGCCTCCTTCTGATGCAACTAAGGCTGGGCTTGAATTTGATATAGAAAAACTAAGGAACGAGAGGAGTTTTTTGATGCAAGAGGTGGTTGAGTTGAAGCAACAGCAGAGAACAACACTTCAACGTGCGAGGCAAGAACAGAGAGATATAGGGTCTTCTAAAGTCAGGAGAATTGTCAAGCAGCACCAAGGCCAAACAGGAATATCAGATTCTTTGAATGAAGGGCAGATTGTAAGATACCAACCTGATTGGAGAAATATATCCATCTCTTCTCAAGTACTAGAAGTGTATCCAGTTTCACTTGAAGAGTCTCCAAAATACCTTTCTCAGGCATTGGCAAGAGAATTGAGTGAAGGCGTTGAGAATCTGACATCAGATGAATTGGCCATAGTGCATGAGATTGTGCCAGCTGCTGACACCATTGGGTTAAAGTCATCAAGCTTTAGACTTGTAGATACCCTTTTCAAAGGGAAAAATGTCACGAGCTCAAATCAAGAAGTTCTTGCAGATGAGTTTGTTTCTTTTGCAAAGGATTTGACCAATGAGGCAGAATTTCCAGAGTTTTCTCCTCTTGGAACTGAAGATAAATGGAACACCAGCTTTAATATTAGTGGTGCTCCTTCAAGCTCTGACAATGAGCCTTGGGGGAATCCTATCAATTACGAAGTGCCAGAATTTGGAGTCACAACTGGTATGTCAGACAAGTGGGATATTAGCTCACTTGTAAACAACAAAAAGAAATGA	963	0.4133	MSGIHCFNSPRGTAVHSRILHIYSNRILFERRRNISLSVYYSSLFSFQRGNRHLLNNIQRRRPPQSQQVGTYIRPPSDATKAGLEFDIEKLRNERSFLMQEVVELKQQQRTTLQRARQEQRDIGSSKVRRIVKQHQGQTGISDSLNEGQIVRYQPDWRNISISSQVLEVYPVSLEESPKYLSQALARELSEGVENLTSDELAIVHEIVPAADTIGLKSSSFRLVDTLFKGKNVTSSNQEVLADEFVSFAKDLTNEAEFPEFSPLGTEDKWNTSFNISGAPSSSDNEPWGNPINYEVPEFGVTTGMSDKWDISSLVNNKKK	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca03g02476	320	PANTHER	HEAT STRESS TRANSCRIPTION FACTOR A-3	46	316	-	-
	Cca03g02476	320	Coils	Coil	81	119	-	-
	Cca03g02476	320	PANTHER	HEAT SHOCK TRANSCRIPTION FACTOR	46	316	IPR027725	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca03g02476	46	300	HSF	AT5G03720	26.510	2.91e-13	68.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca03g02476	K09419		-	gmx:100788429	347.436

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca03g02476	03	45927086	45934086	Cca03g02476	03	45927086	45934086	ECH