Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02464 ATGACAAATAGAGCAATGTTTCAAACAACTAATTGGATCTCACAGACCATGGCGTTGACTTCACAATATCATCCACTCTTTCTGCTACTGCTACTGCTCTCTCTATCCATGCTTCTCTTCCTCCGCCGTCGCAAAACCCGTCTTCCGCCGGGGCCAAGGGGGTGGCCCATCTTCGGCAACATGTTCCAGCTGGGGGAGATGCCCCACCGCACCATGGCTGCCCTGAGGGAGAACCACGGCCCGGTGGTCTGGCTCCAAATGGGCGCCATAAAGACCATGGCCATTCTCTCGGCGGAGGCCGCCGCCGTGTTCTTCAAGCGCCACGACCACGCCTTCGCCGACCGCACCATAACCGAAATCATGCGCGTCCACAACTACCACAACTCCTCCCTCGCCCTCGCCCCCTACGGCCCGTACTGGCGCCTCATGCGCCGCCTCGTCAACGCCGACATGCTCGTCGCCAAGCGCATCAACGACACCGCCGGCGTGCGTCGCAAGTGCGTCGGCGACATGATCACGTGGGTGGCGGCGGAAGCGCGGAAGTCGGAACCCGGTCGCGGGGTCCACGTGGCGCGATTCGTGTTCCTGATGACGTTCAACCTCTTCGGGAACCTGATGCTGTCGCGTGACCTTTTCGACCCCGAGTCGGAGGAGGGTTCGGAGTTTTTCACGGCCATGATGGGGTTGATGGAGTGGACGGGGCACGCTAACGTCACCGACCTGTTCCCGTGGCTTGGGTGGCTGGACCCCCAGGGGTTGAGGGGGAAGATGGACAGGGACATGGGAAAGGCCATTGCAATCGCTTCGAGGTTCGTGAAACAGCGTTTGGAACAGCACCGTGGTGGCAACGAGTCAAGGGACTTCTTGGATGTCCTTCTTGACTTTCAAACCAACAACACTGAGCAAGCACTCAACGTCTCAGATAAAGATCTCAACATTTTCATATTGGAAATATTCCTGGCTGGATCCGAAACCACGAGCAGCAGCATTGAGTGGGCTTTGACGGAGCTTCTATGCAACCGGGAGTGTCTAAGAAAGGTGAAAAGCGAGCTTAATAGGGTGGTTGGGCGCGAGCGAGAAGTTGAGGAAAGCGACATAGAGAAGCTTCCGTACCTACAAGGCGTGGTTAAGGAAACACTTCGGTTACATCCTCCGATTCCGTTGCTTGTTCCTCGGAAAGCCACGGAGGACACAGAGTTCATGGGATACTACATACCCAAAGACACGCAGGTTTTGGTGAACGCGTGGGCCATTGGGAGAGACCCCAGCGCCTGGGATGAGCCACTTGCCTTCAACCCCCAACGCTTTTCTGATTGCAAGAACAACGTTGACTACAAGGGCCATCACTTTGAGTTCATTCCCTTCGGAGCTGGACGCAGGATGTGTGCGGGTGTACCCTTGGCGCATAGAGTGCTCCACCTCGTCTTGGGTTCCTTGCTTCACCGTTTCGATTGGGAACTTGACTGCAACGTCACGCCCTCCACCATGGACATGACAGACAAGCTCGGCATAACCATGCGAAAGTCTCAACCCTTGCTTGCGGTCCCAAAATTCATTCCCACTAAATAA 1569 0.5621 MTNRAMFQTTNWISQTMALTSQYHPLFLLLLLLSLSMLLFLRRRKTRLPPGPRGWPIFGNMFQLGEMPHRTMAALRENHGPVVWLQMGAIKTMAILSAEAAAVFFKRHDHAFADRTITEIMRVHNYHNSSLALAPYGPYWRLMRRLVNADMLVAKRINDTAGVRRKCVGDMITWVAAEARKSEPGRGVHVARFVFLMTFNLFGNLMLSRDLFDPESEEGSEFFTAMMGLMEWTGHANVTDLFPWLGWLDPQGLRGKMDRDMGKAIAIASRFVKQRLEQHRGGNESRDFLDVLLDFQTNNTEQALNVSDKDLNIFILEIFLAGSETTSSSIEWALTELLCNRECLRKVKSELNRVVGREREVEESDIEKLPYLQGVVKETLRLHPPIPLLVPRKATEDTEFMGYYIPKDTQVLVNAWAIGRDPSAWDEPLAFNPQRFSDCKNNVDYKGHHFEFIPFGAGRRMCAGVPLAHRVLHLVLGSLLHRFDWELDCNVTPSTMDMTDKLGITMRKSQPLLAVPKFIPTK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02464 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 25 518 - -
Cca03g02464 522 Pfam Cytochrome P450 49 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 518 - -
Cca03g02464 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Cca03g02464 522 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 SUPERFAMILY Cytochrome P450 41 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02464 522 Gene3D Cytochrome P450 40 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02464 Cca-Chr3 45733158 45735031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02464 29 516 Cytochrome P450 AT3G52970 43.110 4.35e-143 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02464 K22983 - gmx:100785241 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02464 03 45733158 45735031 Cca03g02464 03 45733158 45735031 ECH