Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02463 ATGAAAAGGCTTTCTCTCTCTCCCATAAACCCCGCACtggccttaaccttggccttggccctgtccctgtccATCCTCTGCGTCGCAGAGGGAGCATACCAGAATGATACACACGCCCTCACCCAATTCCGCCTCCAAACCGACACCCACGGCAACCTCCTCCCCAACTGGACCACCGCCGACGCCTGCTCCGCGGCATGGCGCGGCGTCGAATGCTCCCCAAACGGCAGAGTGGTGGGCCTCTCCCTCCCTTCACTTAACCTCCGCGGCCCAATTGATTCTCTTTCCTCACTCACGTACCTCCGCTTCCTCGACCTCCACGAAAACCGCTTAAACGGCACCGTGTCGCCTCTCTTGAACTGCACCAGCCTCGAACTCCTGTACCTCGCCGGCAACGACTTCTCCGGGGAGATCCCACCGGAGATATCCTCCCTCAGGCTGCTCCTCCGCCTTGACATATCCGACAACAACATACGAGGCCCCATACCCGACGAACTCGCTAAACTAACCCACCTCCTCACGCTCCGGTTGCAGAACAACGCTCTCTCCGGCCACGTCCCCGACCTCTCCACTTCCCTCCACAACCTCACCGAACTCAACGTCACCAACAACGAACTCCGCGGCCACGTCCCCGATTCCATGCTCACCCAATTCGGCAACGCAACCTTCGCCGGAAACCACGCCCTCTGCGGCTCCACGCCCTTACCCAAATGCCCCACCAACGAAACAGAGTCACCGACTCCTCGTGTAACCGTTCCTTCGCTCCCGCAAACAACGGGAGTTTCTGTAACTGCAAGTGATACTCCGAGAAAGAAAGGGATGAGCGCGGGTGTCATCGTGGCGATCGTGGTGGCGGTCTGCGTGGCGGTGCTGGTGGCGGCGTCGTTCGCGGTGGCGCACTGCTGCGCCAGGGGAGGTGGCTCCGGGTCGGTGGTGGGGAGCGAGATGAAGAGCGGGAGCAGCTCCGGGAGCGAGAAGAAAGTATATGGGAATGGCGCAAATGTGGATAGAGATAGCGATGGGACGAACACGGATGCAGAACGAAGCAAGCTTGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTTCTTCGGGCTTCGGCGGAGATGCTGGGGAAGGGAAGCTTGGGAACGGTTTACAGAGCGGTGTTGGACGACGGTTGCACCGTGGCTGTGAAGAGACTGAAAGACGCTAACCCCTGCGAGAGGAACGAGTTTGAACAGTACATGGACGTTGTAGGGAAGCTGAAGCACCCCAACATTGTGAGGCTGAGAGCTTATTATTACGCCAAGGAAGAAAAACTTCTGGTGTACGATTATCTCCCCAATGGAAGCTTGCATAACCTTCTCCATGGGAACAGGGGACCAGGGAGGATCCCGTTGGATTGGACGACGAGAATAAGCTTGGTGTTAGGAGCGGCGAAGGGGTTGGCTCGAATTCACGCGGAGTACAACGCATCCAAGATACCTCACGGGAACGTCAAGGCTTCGAACGTGCTTCTGGACAAGAACGGGGTTGCTTGCGTTTCAGACTTTGGGCTATCGCTGTTGTTGAATCCCGTTCACGCGATAGCCAGGTTGGGGGGGTACAGGGCGCCGGAGCAGGTGGAGGTGAAGAGGCTCTCGCAGGAGGCTGACGTGTACGCCTTCGGGGTGTTGGTGTTGGAGGTGGTGACGGGGAGGGCGCCGTCGGAGCAGGGTGGCATGGATCTCCCGACGTGGGTGCGGTCGGTGGTGAAGGAGGAGCTGTTCGATGAGGAGCTGCTGAGGTACAAGAATATCGAGGAGGAGTTGGTGGCGATGGTGCAGGTGGGGCTGGCGTGCGTGGTGGCGCAGGCCAAGAAGAGGCCGACCATGTTGGAGGTTGTGAAGATGATTGAGGATTTGAGGGTCGGAGAGGATTATGATGAGTCCCGCTCCCGCAACTCGCTCTCGCCTTCCCTCGCCACCACCGATGACGGCGTCGCTTAG 1977 0.5756 MKRLSLSPINPALALTLALALSLSILCVAEGAYQNDTHALTQFRLQTDTHGNLLPNWTTADACSAAWRGVECSPNGRVVGLSLPSLNLRGPIDSLSSLTYLRFLDLHENRLNGTVSPLLNCTSLELLYLAGNDFSGEIPPEISSLRLLLRLDISDNNIRGPIPDELAKLTHLLTLRLQNNALSGHVPDLSTSLHNLTELNVTNNELRGHVPDSMLTQFGNATFAGNHALCGSTPLPKCPTNETESPTPRVTVPSLPQTTGVSVTASDTPRKKGMSAGVIVAIVVAVCVAVLVAASFAVAHCCARGGGSGSVVGSEMKSGSSSGSEKKVYGNGANVDRDSDGTNTDAERSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHNLLHGNRGPGRIPLDWTTRISLVLGAAKGLARIHAEYNASKIPHGNVKASNVLLDKNGVACVSDFGLSLLLNPVHAIARLGGYRAPEQVEVKRLSQEADVYAFGVLVLEVVTGRAPSEQGGMDLPTWVRSVVKEELFDEELLRYKNIEEELVAMVQVGLACVVAQAKKRPTMLEVVKMIEDLRVGEDYDESRSRNSLSPSLATTDDGVA 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02463 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 648 - -
Cca03g02463 658 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Cca03g02463 658 MobiDBLite consensus disorder prediction 638 658 - -
Cca03g02463 658 MobiDBLite consensus disorder prediction 307 343 - -
Cca03g02463 658 ProSiteProfiles Protein kinase domain profile. 367 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02463 658 PANTHER LRR RECEPTOR-LIKE KINASE 14 648 - -
Cca03g02463 658 SUPERFAMILY Protein kinase-like (PK-like) 371 628 IPR011009 -
Cca03g02463 658 Pfam Protein kinase domain 371 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02463 658 Gene3D Ribonuclease Inhibitor 30 113 IPR032675 -
Cca03g02463 658 Gene3D Ribonuclease Inhibitor 115 239 IPR032675 -
Cca03g02463 658 MobiDBLite consensus disorder prediction 313 328 - -
Cca03g02463 658 MobiDBLite consensus disorder prediction 238 268 - -
Cca03g02463 658 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Cca03g02463 658 Gene3D Transferase(Phosphotransferase) domain 1 443 651 - -
Cca03g02463 658 SUPERFAMILY L domain-like 34 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02463 Cca-Chr3 45720567 45722808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02463 34 654 Receptor kinase-like Gene Family AT2G36570 63.429 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca03g02463 Pkinase 4.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02463 - - ccaj:109796875 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02463 03 45720567 45722808 Cca03g02463 03 45720567 45722808 ECH
Cca03g02463 03 45720567 45722808 Cca02g00507 02 10789672 10792459 PCT