Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02434 ATGGGTTTGCTTGGGAGAGATAGCTTGCAGTATAGTAGGACAAAGTTCAACCTCGGTAATGTTGGTGGTCTCAACTCAAAGTCGAAGGCTGAGGTCGGGGTTTGCGACTTTCTGATGGTGGTGTCGCAATTGATTTTGCGGCTTCGAGTGTCTGCACTCACAGGTGAGTCACTACCGGTGACAAAGGGTCCAGGTGATGGTGTTTATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGTTATGGTCATTGCAACCGGAGTCCAACAAGATCTTAAAGTTTAA 285 0.4667 MGLLGRDSLQYSRTKFNLGNVGGLNSKSKAEVGVCDFLMVVSQLILRLRVSALTGESLPVTKGPGDGVYSGSTCKQGEIEVMVIATGVQQDLKV 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02434 94 Pfam E1-E2 ATPase 39 90 - -
Cca03g02434 94 PANTHER CALCIUM-TRANSPORTING ATPASE 46 89 - -
Cca03g02434 94 SUPERFAMILY Calcium ATPase, transduction domain A 45 89 IPR008250 -
Cca03g02434 94 Gene3D - 46 86 - -
Cca03g02434 94 PANTHER PLASMA MEMBRANE ATPASE 1 46 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02434 Cca-Chr3 45405637 45406376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02434 46 89 Primary Pumps ATPases AT5G62670 79.545 9.31e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02434 K01535 - csin:114282923 77.7962