Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02423 ATGGGTTTGCTTGGGAGAGATAGCTTGCAGTATAGTAGGACAAAGTTCAACCTCGGTAATGTTGGTGGTCTCAACTCAAAGTCGAAGGCTGAGGTCGGGGTTTGCGACTTTCTGATGGTGGTGTCGCAATTGATTTTGCGGCTTCGAGTGTCTGCACTCACAGGTGAGTCACTACCGGTGACAAAGGGTCCAGGCGATGGTGTTTATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGTTATGGTCATTGCAACCGGTGTTCatgacacacgcacatattaa 285 0.4526 MGLLGRDSLQYSRTKFNLGNVGGLNSKSKAEVGVCDFLMVVSQLILRLRVSALTGESLPVTKGPGDGVYSGSTCKQGEIEVMVIATGVHDTRTY 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02423 94 Gene3D - 46 86 - -
Cca03g02423 94 PANTHER CALCIUM-TRANSPORTING ATPASE 46 90 - -
Cca03g02423 94 Pfam E1-E2 ATPase 39 89 - -
Cca03g02423 94 PANTHER PLASMA MEMBRANE ATPASE 1 46 90 - -
Cca03g02423 94 SUPERFAMILY Calcium ATPase, transduction domain A 45 89 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02423 Cca-Chr3 45336838 45337577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02423 46 89 Primary Pumps ATPases AT5G62670 81.818 6.28e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02423 K01535 - csin:114282923 80.8777