Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02407 ATGGTGGTGGCAGAGTTCAATAGTGGTGGTTTGAGAGGTATGAGGGGCTTCAGCTACCATGTTCTCACCGGTCGGTGGTTCATGCTATTTGCTTCTCTACTCATCATGTCCGTTGCAGGAGCAACCTACATGTTCGGAATATACTCTAACGAAGTCAAAACCTCGTTGGGGTACGACCAATCCACTCTCAACTTGCTAGGCTTCTTCAAAGACCTTGGTGCCAACGTTGGAGTGATATCCGGGTTGGTGAATGAGATAACCCCACCGTGGGTTGTACTCTCAATTGGGGTCATCATGAACTTCTTTGGCTACTTCATGATATGGCTCGCTGTCTCGGGTCGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACTTTTGCCAACACCGGTGCTTTGGTCACGTGTGTCAAGAACTTCCCAGGAAGCCGTGGCAGTATTCTAGGCCTTCTCAAAGGTTATGTTGGTCTAAGTGGTGCCATCATTGCACAACTCTACCATGCATTCTATGGTGATCACAACCCTCAGGCTCTTATCTTGCTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATAAGGATAATGAACACAATACACCAACCCAAAGACAACAGAGTTTTCTACCACCTTTTATATATTTCACTTGGCCTTGCTGTGTTTCTCATGGTTTTGATTGTTGTGCAAAACAAGGTTAGTTTCTCGAGGATCGAGTACATTGTCGATGGCCTTGTGGTTTTCTCCTTTCTCCTTCTCCCTCTTGCTTTGGTATTTAGAGAGGAGATAAACCAATTGAAATCCAAAACCATGGCTGATTCAGAACCTCAGTTGAAAGTAGTAACTGAAGTGATGCCACATCCAAACGTGCAACAAGAAGTAAAAGCTACCACAAGCTCGCACGAGGAAAGTTGTTGTGCAGGGAACATACTGAAACCTCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCCTTGTTCAGCATAGACATGCTGATTCTGTTCATTGCAACAACATTTGGTGCCGGTGGAACATTAACAGCCATAGACAACTTGGGACAGATTGGACACTCATTGGGGTACCCTAGTAAGAGCACTACCACCTTTGTGTCCTTAGTGAGCATATGGAACTACTTGGGACGCGTGGCTGCAGGTTATGCCTCTGAAATCTTCTTGACCAAATACAAAGTCCCTCGTCCCTACATGCTCACTCTAGTATTGCTTCTCTCATGTGTTGGCCATGTTCTGATCGCGCTTGGTGTCCCAAACTCTCTCTACTTGGCTTCGGTGATTATTGGGTTTTGTTTTGGGGCTCAATGGCCGCTAATGTTTGCAATCATATCAGAAGTATTTGGGCTTAAATACTACTCCACGTTGTACAACTTTGGAGCTGCAGCAAGCCCTGTTGGGTCTTACATTCTGAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACAATTGAAGGCCAAAGGCCTCAAGCGAGAAGCAGGGAAGGACCTGACTTGCGTGGGAGTGGAATGCTACAGAATGGCTTTTATCATAATCACTGCTTCAACGTTGGTTGGTTGTTTTGCTTCGTTCGTTTTGGCAATGAGGACTAGAAAATTTTACAAAGGGGATATCTATAGAAAGTTCAGAGTGGAACATGAAACAACAGAGAATGAGATGGAAGTTACCAAGACTGGTAATTAA 1740 0.4489 MVVAEFNSGGLRGMRGFSYHVLTGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQSTLNLLGFFKDLGANVGVISGLVNEITPPWVVLSIGVIMNFFGYFMIWLAVSGRIAKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSILGLLKGYVGLSGAIIAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRIMNTIHQPKDNRVFYHLLYISLGLAVFLMVLIVVQNKVSFSRIEYIVDGLVVFSFLLLPLALVFREEINQLKSKTMADSEPQLKVVTEVMPHPNVQQEVKATTSSHEESCCAGNILKPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNLGQIGHSLGYPSKSTTTFVSLVSIWNYLGRVAAGYASEIFLTKYKVPRPYMLTLVLLLSCVGHVLIALGVPNSLYLASVIIGFCFGAQWPLMFAIISEVFGLKYYSTLYNFGAAASPVGSYILNVKVAGVLYDKEALKQLKAKGLKREAGKDLTCVGVECYRMAFIIITASTLVGCFASFVLAMRTRKFYKGDIYRKFRVEHETTENEMEVTKTGN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02407 579 Gene3D MFS general substrate transporter like domains 335 552 IPR036259 -
Cca03g02407 579 CDD MFS_Mch1p_like 24 539 - -
Cca03g02407 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 577 - -
Cca03g02407 579 SUPERFAMILY MFS general substrate transporter 24 552 IPR036259 -
Cca03g02407 579 Pfam Nodulin-like 25 270 IPR010658 -
Cca03g02407 579 PANTHER MFS TRANSPORTER 9 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02407 Cca-Chr3 45161833 45164008 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02407 14 562 Nodulin-like Gene Family AT2G39210 64.222 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02407 - - gmx:100797779 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02407 03 45161833 45164008 Cca03g02407 03 45161833 45164008 ECH
Cca03g02407 03 45161833 45164008 Cca02g00453 02 9623964 9625718 PCT