Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02405 ATGGTGATGGCAAAGTTCACTGGTGGTGGCTTGAGCTACCATGTTCTCACTGGCCATTGGTTCATGCTATTTGCATCTTTGCTCATCATGGCAGCTGCTGGTGCAGCCTACATGTTTGGCATGTACTCCAACGAAATCAAAACCTCTTTGGGGTACGACCAAACCACTCTCAACTTGCTAAGCTTCTTCAAAGACGTTGGTGCCACCGTTGGAATCATATCCGGGTTAGTGAATGAGATAACTCCACCCTGGGTGGTTCTCTCAATTGGGATCATCATGAACTTCTTCGGCTACTTCATGATATGGCTCGCTGTCACTGGCCAAATCACCAAACCCCAAGTGTGGTTAATGTGTCTTTACATTTGCATTGGCTCAAATTCTCAAACCTTCGCCAACACAGGTGGCACAGTCACGTGTGTCAAGAACTTCCCAGGAAGCCGTGGCAATGTTTTAGGCCTTCTCAAAGGCTACGTTGGTCTAAGTGGTGCCATCATCGCACAACTCTACCATGCATTCTATGGTGATCACAACCCTCAGGCTCTTATCTTGCTCATTGCTTGGCTCCCTGCTGCTGTTTCCTTCCTTTTCCTTCCAACAATAAGGATCTTGAATACCCTACACCAACCCAATGAGAACAAAGTTTTCTACCACCTTCTATATATCTCACTCGCCCTAGCTGGATTTCTCATGGTTTTGATCATCATGCAGAACAAGCTCAGTTTCACAAGGTCTGAATATGTAGCAGATGGAATTGTGGTATTTTTCTTTCTTCTCCTCCCACTTGTTGTGGTATTTAGAGAGGAATTTAACCAATTGAAAACAAAAACACAAGGGTTGTCTGATTCTACACCGCAGTTGAAAGTAGTCACTGATGTGCCACACCCAAATTCAAACGTGGAGCAAGAAGTACAAGAAAGTTCTTGTCTAGGGAACATACTCAACCCTCCAAAGAGAGGAGAAGACTACACCATTTTGCAAGCTTTGTTCAGCATTGACATGCTGATTTTGTTTATTGCAACAACATTTGGTGCTGGAGGAGCATTAACAGCCATAGACAATTTGGGACAGATTGGACGGTCATTGGGATACCCTAGGAAGAGCATTACAACATGTGTGTCGTTATTAAGCATATGGAACTACTTGGGAAGAGTAGTGGCAGGTTATGCCTCTGAAATCTTCTTGACCAAATACAAATTCCCTCGTCCCTCTATGCTCACTCTAGTTATCCTACTCTCATGTGTTGGCCATATTCTGATCGCACTTGGTGTCCCAAACTCTCTCTACTTGTCTTCGGTGATTATTGGGTTCTGTTTGGGAGCTCAATGGCCACTAATGTTTGCAATCATATCAGAAGTATTTGGCCTTAAATACTACTCCACGTTGTACAACTTTGGAGCTGTGGCAAGCCCTGTTGGGTCTTACATTCTGAACGTAAGATTAACGGGTGTTTTGTATGATAAAGAGGCTTTGAAACAGTTGAAGGCGAAAGGACTCGCGAGAGAAGCGGGGAAGGAACTAAATTGCGTAGGGGTGCAGTGCTACAGAATGGCGTTTATCATAATCACGGCTGCAACGCTGTTTGCATGCATTGTTTCGTTTATTTTGGTGATGAGGACTAGAAAATTTTACAAAGGAGATATCTATAGAAAGTTCAGAGTGGAAGATGAAAAATCGGGGAATGAGATAAAAATTGGTAATAGTATTGTTTTTCGTGAAACAGAAGAAGGACACCGCGATGTTGCGTAG 1746 0.4359 MVMAKFTGGGLSYHVLTGHWFMLFASLLIMAAAGAAYMFGMYSNEIKTSLGYDQTTLNLLSFFKDVGATVGIISGLVNEITPPWVVLSIGIIMNFFGYFMIWLAVTGQITKPQVWLMCLYICIGSNSQTFANTGGTVTCVKNFPGSRGNVLGLLKGYVGLSGAIIAQLYHAFYGDHNPQALILLIAWLPAAVSFLFLPTIRILNTLHQPNENKVFYHLLYISLALAGFLMVLIIMQNKLSFTRSEYVADGIVVFFFLLLPLVVVFREEFNQLKTKTQGLSDSTPQLKVVTDVPHPNSNVEQEVQESSCLGNILNPPKRGEDYTILQALFSIDMLILFIATTFGAGGALTAIDNLGQIGRSLGYPRKSITTCVSLLSIWNYLGRVVAGYASEIFLTKYKFPRPSMLTLVILLSCVGHILIALGVPNSLYLSSVIIGFCLGAQWPLMFAIISEVFGLKYYSTLYNFGAVASPVGSYILNVRLTGVLYDKEALKQLKAKGLAREAGKELNCVGVQCYRMAFIIITAATLFACIVSFILVMRTRKFYKGDIYRKFRVEDEKSGNEIKIGNSIVFRETEEGHRDVA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02405 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 567 - -
Cca03g02405 581 SUPERFAMILY MFS general substrate transporter 21 546 IPR036259 -
Cca03g02405 581 PANTHER MFS TRANSPORTER 11 567 - -
Cca03g02405 581 Pfam Major Facilitator Superfamily 336 539 IPR011701 GO:0022857|GO:0055085
Cca03g02405 581 Gene3D MFS general substrate transporter like domains 323 543 IPR036259 -
Cca03g02405 581 CDD MFS_Mch1p_like 18 529 - -
Cca03g02405 581 Pfam Nodulin-like 19 265 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02405 Cca-Chr3 45145950 45147726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02405 11 552 Nodulin-like Gene Family AT2G39210 65.405 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02405 - - gmx:100798313 925.235