Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02402 | ATGAGAAGAGTTGAGAGCAGATACGATTTGATGGCTCGTAGTGTATCGTACATTACTGGGTCGCAGCTTCTCTCTCTCAGACGCCATCCAAGCATCGCCATCGTTGATGTCAGGGACGATGAGAGGAGTTACGACGGCCACATATCCGGCTCTCTTCATTACGCAAGCGACTCTTTCTCCGATAACATCTCAAATCTCATTCAAGCAGTTAAAGGCAAAGACACTCTCGTCTTCCACTGCGCTCTAAGTCAGGTTCGTGGCCCAACTTGTGCTAGGAGGCTCGTCAATTATCTTGAGGAGAACAAGGAAGATACTGGGATAAAGAACATTATGGTCTTGGAACGTGGCTTCAATGGGTGGGAAGCTTCTGGTAGACCTGTTTGCCGCTGCACTAACATTCCTTGCAAAGGAGAGTGA | 417 | 0.482 | MRRVESRYDLMARSVSYITGSQLLSLRRHPSIAIVDVRDDERSYDGHISGSLHYASDSFSDNISNLIQAVKGKDTLVFHCALSQVRGPTCARRLVNYLEENKEDTGIKNIMVLERGFNGWEASGRPVCRCTNIPCKGE | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02402 | 138 | SMART | rhod_4 | 18 | 126 | IPR001763 | - | |
Cca03g02402 | 138 | Pfam | Rhodanese-like domain | 23 | 122 | IPR001763 | - | |
Cca03g02402 | 138 | ProSiteProfiles | Rhodanese domain profile. | 28 | 129 | IPR001763 | - | |
Cca03g02402 | 138 | PANTHER | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 | 7 | 135 | - | - | |
Cca03g02402 | 138 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 12 | 136 | IPR036873 | - | |
Cca03g02402 | 138 | Gene3D | - | 10 | 138 | IPR036873 | - | |
Cca03g02402 | 138 | PANTHER | ARSENATE REDUCTASE 2.1 | 7 | 135 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02402 | 11 | 85 | Sulfurtransferasese or Rhodanese | AT5G03455 | 76.000 | 3.77e-37 | 121 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02402 | K18065 | - | gmx:100305790 | 258.84 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g02402 | 03 | 45115005 | 45117624 | Cca03g02402 | 03 | 45115005 | 45117624 | ECH |