Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02391 ATGGGTAAAACAGCATGTGGTACTAGAAGCTCTTGGGGATTGTGGATGGGAGGGTTTGGAACAGTGGTGCACGTGATGAGGAAACTTCACACCACTTTCTCACGTGCCAAGGGGGTGAAGCAAGGCCATTTTGTGGTGATTGCAACCCAAGGATGGAAGCCTGAGCGATTCTTTGTTGAGTTGGGGTTTTTGGATCACCCTGACTTTGTCAAGTTGTTGAACCAAGCTGAAGAAGAGTTCGGCTTCTCTCAGGTTGGAGCACTTGCAATCCCTTGCCAACCAGATGACCTCAAGAGAATCATTAATGGAGGCAGCAGCAAAAATAATAGAAACAACAACAAGGCCGTTACACATGCTGAGTTAAAGGGTAGGCACAAGAAAGCCAGATTATGCACCATCTTGTTCTCTTATCACCGTTGCATCGTTGGGGATGGTCGCTTTTTTTTTCTTCTTCCACAAAGCAAAAATGTAATGACGATGGAGTAG 486 0.4588 MGKTACGTRSSWGLWMGGFGTVVHVMRKLHTTFSRAKGVKQGHFVVIATQGWKPERFFVELGFLDHPDFVKLLNQAEEEFGFSQVGALAIPCQPDDLKRIINGGSSKNNRNNNKAVTHAELKGRHKKARLCTILFSYHRCIVGDGRFFFLLPQSKNVMTME 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02391 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 111 IPR003676 GO:0009733
Cca03g02391 161 PANTHER SMALL AUXIN-UP RNA-RELATED 17 111 - -
Cca03g02391 161 Pfam Auxin responsive protein 35 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02391 Cca-Chr3 44984357 44985031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02391 39 122 Calmodulin-binding Proteins AT4G34750 39.326 2.04e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02391 - K14488 gmx:100795119 169.474