Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02390 ATGGAGGTTGCAAGGAATAATAAGAAGAATCTCAAGTCTATGATCACAAAGGTGCTAAGGGGTCTTCAATTCTTGGCACCGAGTGGAGCACATTCGAGGAGAGTTTGTTATTTGAGTGACATTGATGAGGAGGAGAAGGAAAATGCAACAAAGGTGCCAGAAGATGTTAAAGAAGGACATTTTGCGGTTATAGCAATGCATGGTGAAGAAACCAAAAGGTTCGTTGTTGAGTTAGATTATTTGACTGATCCTGATTTCTTGAGGCTGCTAGAACAAGCAAAGGAAGAATATGGCTTTGAACAGAAGGGTGCACTTGCAGTACCCTGCACCCCCCAAGAACTTCAGCAGATCATACAGAATCGACTACGTAATTAA 375 0.4187 MEVARNNKKNLKSMITKVLRGLQFLAPSGAHSRRVCYLSDIDEEEKENATKVPEDVKEGHFAVIAMHGEETKRFVVELDYLTDPDFLRLLEQAKEEYGFEQKGALAVPCTPQELQQIIQNRLRN 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02390 124 Pfam Auxin responsive protein 17 118 IPR003676 GO:0009733
Cca03g02390 124 PANTHER F8A24.8 PROTEIN 11 121 - -
Cca03g02390 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02390 Cca-Chr3 44964870 44965483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02390 12 124 Calmodulin-binding Proteins AT5G20810 35.593 1.19e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02390 - K14488 gmx:102661602 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02390 03 44964870 44965483 Cca03g02390 03 44964870 44965483 ECH