Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02381 ATGAAGGGAAAGTTTCTAAGAGGGTGCCTTAACAAGTGGAAGAAAATGGGGAGTCGAGTAATCCATTGTGCTGCGTATGGTTACTGCTGCTCATGGGAAGTGTGGACATCCATGCATGAAGGAGACTCCATCCCCAACGATGTGCCAAAGGGTCACTTGGTTGTGTACGTGGGAGAGCAACATAAGAGATATGTCATCAACATTACGTTGCTCAACCATCCTCTCTTCAAGGCCTTGCTGGATCAAGCTCAGGATGAGTATGATTTCGTTGCAGACTCAAAGCTCTACATTCCTTGCACTGAGCATCTTTTCCTCACTGTCCTTCGCCATGCAAGCTCTTCTCATAATCAACAACCACTCTCAGTCTTCCATCTCTAA 378 0.463 MKGKFLRGCLNKWKKMGSRVIHCAAYGYCCSWEVWTSMHEGDSIPNDVPKGHLVVYVGEQHKRYVINITLLNHPLFKALLDQAQDEYDFVADSKLYIPCTEHLFLTVLRHASSSHNQQPLSVFHL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02381 125 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 3 118 - -
Cca03g02381 125 Pfam Auxin responsive protein 13 109 IPR003676 GO:0009733
Cca03g02381 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 118 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02381 Cca-Chr3 44877847 44878224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02381 32 108 Calmodulin-binding Proteins AT4G34750 41.026 3.27e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02381 K14488 - gmx:100793017 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02381 03 44877847 44878224 Cca03g02381 03 44877847 44878224 ECH
Cca03g02381 03 44877847 44878224 Cca02g00444 02 9333095 9333709 PCT