Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02360 ATGAGTGTCATCGACATTCTCACCAGAGTTGATTCCATTTGCCAAAAGTACGACAAATACGACGTCGCAAAGCAGAGGGATTCCAATATCTCCGCCGACGATGCATTCGCCAAACTCTACGCCTCCGTCGACGCCGATATCGAAGCCTTACTTCAGAAAGCGGAAACCGCTCCCAAGGAGAAAACTAAGGCATCTACGGTAGCGATCAATGCCGAGATTCGTCGAACCAAGGCTAGGTTGTTGGAGGAGGTTCCCAAGTTGCAGAGATTGGCTATGAAAAAGGTAAAGGGCCTTTCATCACAAGAATTTGCTGCTCGTAATGATTTGGTTCTTGCATTGCCGGATAGGATTCAAGATATCCCAGATGGGACCCCTGCACCACCCAAACGAACTGGAGGCTGGGCAGCTTCAGCCTCACGTCCTGGAATTAAATTTGATTCAGATGGCCGATATGATGATGAATACTTCCAACAAACTGAAGAATCAAGTCGATTCAGGCAGGAGTATGAAATGCGTAAAATGAAACAGGATCAAGGTTTGGATATGATCGCAGAAGGATTGGATACTTTGAAAAACATGGCACACGATATGAATGAGGAATTGGATAGACAAGTTCCACTGATGGATGAAATTGATACTAAGGTGGATAAGGCATCTTCTGACCTTAAAAATACCAATGTTAGACTTAGAGATACAGTGAACCAGGTTTTTTAA 714 0.444 MSVIDILTRVDSICQKYDKYDVAKQRDSNISADDAFAKLYASVDADIEALLQKAETAPKEKTKASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSQEFAARNDLVLALPDRIQDIPDGTPAPPKRTGGWAASASRPGIKFDSDGRYDDEYFQQTEESSRFRQEYEMRKMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLRDTVNQVF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02360 237 CDD SNARE_Qc 175 230 - -
Cca03g02360 237 Gene3D - 170 231 - -
Cca03g02360 237 PANTHER SYNTAXIN-73 1 233 - -
Cca03g02360 237 MobiDBLite consensus disorder prediction 118 139 - -
Cca03g02360 237 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Cca03g02360 237 PANTHER SYNTAXIN 1 233 IPR045242 -
Cca03g02360 237 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Cca03g02360 237 SMART tSNARE_6 165 232 IPR000727 -
Cca03g02360 237 SUPERFAMILY SNARE fusion complex 165 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02360 Cca-Chr3 44565756 44570269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02360 1 236 SNARE and Associated Proteins AT3G09740 74.370 1.69e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02360 K08506 - gmx:100804155 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02360 03 44565756 44570269 Cca03g02360 03 44565756 44570269 ECH