Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02357 ATGGCAGCATATGCATCTGGTTATTCTCTAGAACACACTCCAACATGGGCAATTGCTCTTGTTTCCTTCATTCTTATCTCCATCTCAATCATCTTGGAGCATCTCATTCATCTCATAATCAAATGGTTGAGGAAACATCGGAAGATAGTTGAAGCAATAGAGAGGCTTAAATCAGAGTTGATGATCTTAGGATTCATGTCGCTTTTGTTGACAGTAACTCAAGATGCCATAATTGAAATCTGCATACCAATGAAGACTGCAGATACTATGCTTCCATGTCGTAAACGTACTACAAATGATACCGCAACAAATTTGGATTCTTGCAGTGCCAAAAATGCAAGTAAGGTTGCTTTAGTATCAAAACATGGAATTCATCAACTTCATATGTTCGTTTTTGTTCTAGCTGTCATGCAAATCGTGTACAGTTTTCTCACCGTTTCTCTGGCAAGGGCCAAGATGAGGCACTGGAAAGCTTGGGATGAAGAGACTCAAACAATCGAATATGAAATTGCCAACGACCCTAATAGATTCAGATATTCGAGGCAAACAACATTCGGAAGACGACACATATCTACTCGTACGGCATCACCAGTATATGTTTGGATTATCAAGGCTATGGAGCAGAGTTTTTTACACATGGCTAACGTTGTTCACCAAATTGTGAAATTTGAGCAGAAGTGTTTTTTCAGACAGTTCTTCCATTCAGTAGAAAAAGTTGATTATCTCACCCTGAGGCATGGTTTCATATCAgcacacttttcagctaggaacagcaacttcgatttccaaaattacattgaacagtcacttgaggaagatttcagaatcatagtgagcattagCCCTGTGATGTGGTTCACCGTTGTTATTTTTTTGCTCGTGGATGTACATGGCTGGCATGTATACCTCTGGTTATCCTATGTTCCCCTCATGCTGGTTCTGGTTGTGGGAGCTAAACTTGAAGTCATTGTCGACGAAATGGCTCTTCAAATGAAGGATATCAATAATGTAACCAAAGGGACCCCACTTGTTTGTCCAAGTGACAAACTCTTCTGGTTCGGCCATCCAGGATTTGTGTTAACACTCATACATTACACTTTATTTGTGAATGCATTCGAGCTTGCCTTCTTTATATGGGTATCAACACAGTTTGGAATAAATTCTTGCTACCACGAACACAGATCATTTACAATCATAAGAGTGGTGATAGCGGTCGCAGTTCAAGTGCTATGCAGCTACGTTACTCTCCCCCTCTATGCATTAGTGGCGCAGATGGGTTCACAAGTGAAGAGCAAAGCGTTGGCTAAAATTCTGAAGCAGTGGCATGTTGAGGTGAGGGAGAGAAGGAGGAAGCAAGAAAAGCTTGTGAAGTCTTTTAGTTTTAGGCACAGAAATAAGTCCTCAGAATGGGGCCAAGGAAATAAGAGTGCCCCTGAGTTTTCTTCCACTCTAGGTGAAAGCAATCGTTCCTATGACGAAGGAGAAATTGTAGAAGAATTGGAGCATTCGGTGAAAACCAAGGCTAGCTCGTCAAGTGATCCACCTAGTTTTGTCTAA 1557 0.3879 MAAYASGYSLEHTPTWAIALVSFILISISIILEHLIHLIIKWLRKHRKIVEAIERLKSELMILGFMSLLLTVTQDAIIEICIPMKTADTMLPCRKRTTNDTATNLDSCSAKNASKVALVSKHGIHQLHMFVFVLAVMQIVYSFLTVSLARAKMRHWKAWDEETQTIEYEIANDPNRFRYSRQTTFGRRHISTRTASPVYVWIIKAMEQSFLHMANVVHQIVKFEQKCFFRQFFHSVEKVDYLTLRHGFISAHFSARNSNFDFQNYIEQSLEEDFRIIVSISPVMWFTVVIFLLVDVHGWHVYLWLSYVPLMLVLVVGAKLEVIVDEMALQMKDINNVTKGTPLVCPSDKLFWFGHPGFVLTLIHYTLFVNAFELAFFIWVSTQFGINSCYHEHRSFTIIRVVIAVAVQVLCSYVTLPLYALVAQMGSQVKSKALAKILKQWHVEVRERRRKQEKLVKSFSFRHRNKSSEWGQGNKSAPEFSSTLGESNRSYDEGEIVEELEHSVKTKASSSSDPPSFV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02357 518 PANTHER MLO-LIKE PROTEIN 5 102 - -
Cca03g02357 518 PANTHER MLO-LIKE PROTEIN 212 517 - -
Cca03g02357 518 PANTHER MLO-LIKE PROTEIN 100 216 - -
Cca03g02357 518 MobiDBLite consensus disorder prediction 466 491 - -
Cca03g02357 518 MobiDBLite consensus disorder prediction 466 489 - -
Cca03g02357 518 PANTHER MLO-LIKE PROTEIN 1 100 216 IPR004326 GO:0006952|GO:0016021
Cca03g02357 518 PANTHER MLO-LIKE PROTEIN 1 5 102 IPR004326 GO:0006952|GO:0016021
Cca03g02357 518 PANTHER MLO-LIKE PROTEIN 1 212 517 IPR004326 GO:0006952|GO:0016021
Cca03g02357 518 Pfam Mlo family 219 469 IPR004326 GO:0006952|GO:0016021
Cca03g02357 518 Pfam Mlo family 106 210 IPR004326 GO:0006952|GO:0016021
Cca03g02357 518 Pfam Mlo family 9 103 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02357 Cca-Chr3 44540742 44547429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02357 9 450 MLO family AT3G45290 49.892 2.92e-161 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02357 K08472 - gmx:100787201 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02357 03 44540742 44547429 Cca02g02038 02 40420524 40425584 ECH
Cca03g02357 03 44540742 44547429 Cca03g02357 03 44540742 44547429 ECH
Cca03g02357 03 44540742 44547429 Cca10g00498 10 5206544 5227022 ECH
Cca03g02357 03 44540742 44547429 Cca04g00754 04 7569844 7576270 ECH