Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02344 ATGCACGGAACACCGGAAGAGACGGAGCAGTTAATAGGATACGGTTTGGGATCCGTATCCATGGACCCGTTCGGGTTAATGGATATACTTGACACTTACTTTCCTCAGCAACTCTTCACCATCGAAGAAACCTGGTTCAATCTCATTTCTGCTCTCATTTCCTTCTTCTCTTCGCCGACGGGACAAAACCTCGCTTCTCAGGTGAAAAATGATTATGGAAACTATGTCTTGTCACTTGACTTGGAGCAGTTGAAAGGCTTATGTTTTATTAAGGAATTTTATGAAATATTAAAGGAGAAACCTAAAATTGCTCTCTTATGCATGGGTGCTGCCGTTCATAAGGTTTTGCTTTCCAAATGGAAATATCACGATCTGGAGCTTGGTGCAAAGGTAGATATTCGTCTTCATAACTGTCCTGAAACTATGATTGCGCTGAAGAACTTAAAAGCAGCTTACATTGACAAGCTTGTCTCAGTTCGCGGTACTGCTGTGAAAGTCAGCACTGTCAGGCCTCTGGTGGTGGAAATGAGTTTCGAATGCTGTAAATGTAAACAAACAATAACGCGTATATTTCCTGATGGAAAATATTCTCCACCATCTACTTGCAATTTGAATGGCTGCAAGAGCAAAATCTTTAATCCGTTGCGATCAACTGCTCAAACTATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAACCTGAAGACCACGAAGAAGGACGCGTGCCTCGAACAGTGGAATGTGAGCTTACTCAAGATCTTGTTGATACATGCATACCTGGAGACGTGGTGACTGTTACTGGAATTATAATAGGAATTAACTCTTACATGGATATTGGAGGAGGGAAGTCAAAGAACAAAAACCAAGGATTTTATTATTTGTACCTTGAAGCTGTATCCATAAAAAACTCAAAGTCACAGTCCATACCTGAGGATCTGCAAGACTCTAATCCCAAAGCTAGACCAACTGAGCTGTTTGATTTATTTTCCTTTTCTTCAAAGGATTTAGAATTTGTCGTGAAGTTTGTACAGGAGCACGGTTCAGATTTATTTCGGCAAATCCTTCAATCTATATGCCCATCCATTTTTGGGCATGAACTTGTTAAAGGTAAATATATGTAA 1125 0.3947 MHGTPEETEQLIGYGLGSVSMDPFGLMDILDTYFPQQLFTIEETWFNLISALISFFSSPTGQNLASQVKNDYGNYVLSLDLEQLKGLCFIKEFYEILKEKPKIALLCMGAAVHKVLLSKWKYHDLELGAKVDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECCKCKQTITRIFPDGKYSPPSTCNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVECELTQDLVDTCIPGDVVTVTGIIIGINSYMDIGGGKSKNKNQGFYYLYLEAVSIKNSKSQSIPEDLQDSNPKARPTELFDLFSFSSKDLEFVVKFVQEHGSDLFRQILQSICPSIFGHELVKGKYM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02344 374 Gene3D - 145 271 IPR012340 -
Cca03g02344 374 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 26 370 IPR031327 GO:0003677|GO:0005524|GO:0032508
Cca03g02344 374 Gene3D - 172 222 - -
Cca03g02344 374 PANTHER DNA HELICASE MCM8 26 370 - -
Cca03g02344 374 SMART mcm 141 374 IPR031327 GO:0003677|GO:0005524|GO:0032508
Cca03g02344 374 Pfam MCM OB domain 145 272 IPR033762 -
Cca03g02344 374 SUPERFAMILY Nucleic acid-binding proteins 71 275 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02344 Cca-Chr3 44417688 44420686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02344 18 371 Core DNA Replication Machinery Family AT3G09660 59.270 4.96e-148 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02344 K10737 - gmx:100784549 625.55