Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02335 | ATGGACATGAAGGAAGCAGAAAGAGTGGTGGTTGCCAAGCCAGTAGCTTCAAGGCCTACTTGTTCTACTTTCAGATCTTTCTCAGAGCTGCTAGCTGGTGCAATCAATGCTTCTCCCACTGTTGCATCTTCTCATGCTGCAGTTTCAGCCATTAGACCCAAGACAGTGAGGTTCAAGCCTGCAGTGAATCACCCCCCTGCTGCCTTTGTATCTTCTCAGGCTGATGCTTTTGGAGCAGCACTTGGTAACTCTTCTGACAAGAGTCCTAAACTTGACACCAAGCAGTCCCTCATATACAAGCCAACGGCAAAACTGGTGTCAAAGACAACTGTGTCTCTTTTGGCAAACATGGGAAATTGCAGTACTAGTCAACAACAAACACGGCACTCAATGGAGACCAATTTTCAACATTCCATCCATGAAAAATTTAGAACCAACTCGAGCTCAATTCCTGATCAGAGTACTATCCCGCATGCAGAAATAAACCAGAGCAGTGAAGCTAGTAAGATGGTGCAGCAGAACACAGAGGAGGACCAAAAAGCTTTAACGTCCTCAGTGAATTGTGATCGACCATCTTATGATGGATATAATTGGAGGAAATATGGTCAGAAGCAAGTGAAAGGGAGCGAGTACCCTCGAAGCTATTACAAGTGCACACATCCCAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGCCAAATTGCAGAAATTGTTTATAAGGGTGAACACAACCATTCTAAGCCACAGATTCCTAAGCGCAACTCAGCAGGGACACAGGGATCAGGGGTGGTGTCTGATGGAATGGTTCAAGATATGTGGAGTAATAGTCACAGTGAGAGGAATGAAGGGAATGAAGGTAGAGTTGAAAACACAGGACTGTCTATGCTTTCGGATTATCATGTCAAAGTTCCACAGCCTAATGATTCTCTTCTTAACACTAATGCTGGTGGAGGAAGCATGGAAAACTCTTGCGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAGGGATTTGAGACTCAGGAGGATGATCACAGAAGTAAAAGAAGGAAAAGTGAGAATCAATCCAATGATGCAACGTTATCAGAGGAAGGTTTGGTAGAGCCGCGCATTGTGATGCAAAGTTTTACGGATTCTGAAATACTTGGAGACGGATTTCGCTGGAGAAAATATGGGCAGAAGGTGGTGAAGGGCAATCCATATCCCAGAAGTTACTATAGATGTACCAACATCAAGTGTAACGTTCGCAAACACGTGGAGAGAGCAATTGATGACCCAAGATCATTTGTGACTACATATGAGGGAAAGCACAATCATGAGATGCCACTCAAGAACACGGGAAATGCAGCCTCAGAAAGAGATTCACAGGCTTCTCTTAGTAAAGATAAACCATGA | 1401 | 0.4404 | MDMKEAERVVVAKPVASRPTCSTFRSFSELLAGAINASPTVASSHAAVSAIRPKTVRFKPAVNHPPAAFVSSQADAFGAALGNSSDKSPKLDTKQSLIYKPTAKLVSKTTVSLLANMGNCSTSQQQTRHSMETNFQHSIHEKFRTNSSSIPDQSTIPHAEINQSSEASKMVQQNTEEDQKALTSSVNCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHSKPQIPKRNSAGTQGSGVVSDGMVQDMWSNSHSERNEGNEGRVENTGLSMLSDYHVKVPQPNDSLLNTNAGGGSMENSCGLSGECEEGSKGFETQEDDHRSKRRKSENQSNDATLSEEGLVEPRIVMQSFTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNIKCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNTGNAASERDSQASLSKDKP | 466 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02335 | 466 | MobiDBLite | consensus disorder prediction | 253 | 269 | - | - | |
Cca03g02335 | 466 | PANTHER | WRKY TRANSCRIPTION FACTOR 44 | 7 | 447 | - | - | |
Cca03g02335 | 466 | MobiDBLite | consensus disorder prediction | 244 | 269 | - | - | |
Cca03g02335 | 466 | Gene3D | WRKY domain | 178 | 252 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | Gene3D | WRKY domain | 370 | 445 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | ProSiteProfiles | WRKY domain profile. | 194 | 251 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | SUPERFAMILY | WRKY DNA-binding domain | 191 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | MobiDBLite | consensus disorder prediction | 436 | 466 | - | - | |
Cca03g02335 | 466 | SMART | WRKY_cls | 384 | 443 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | SMART | WRKY_cls | 192 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | MobiDBLite | consensus disorder prediction | 307 | 368 | - | - | |
Cca03g02335 | 466 | SUPERFAMILY | WRKY DNA-binding domain | 377 | 444 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | MobiDBLite | consensus disorder prediction | 337 | 359 | - | - | |
Cca03g02335 | 466 | MobiDBLite | consensus disorder prediction | 309 | 324 | - | - | |
Cca03g02335 | 466 | ProSiteProfiles | WRKY domain profile. | 379 | 444 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 7 | 447 | IPR044810 | GO:0003700 | |
Cca03g02335 | 466 | Pfam | WRKY DNA -binding domain | 386 | 442 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02335 | 466 | Pfam | WRKY DNA -binding domain | 194 | 248 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g02335 | Cca-Chr3 | 44306226 | 44309478 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02335 | 92 | 445 | WRKY Transcription Factor Family | AT2G37260 | 45.213 | 2.84e-88 | 271 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca03g02335 | WRKY | 7.2e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02335 | - | - | gmx:100794069 | 809.675 |