Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02334 | ATGGGTTGGATTCCCTGTTCTGGATATTCAGGCACTAAGAATAAGATTGAGAAGATGGAAGTTCAAGACAGTCTTGTTGGTCAGATCAAAGCTACCCCAGGAAAGTTGAAGAGGAATTCATCAAAAAATTCAAAAGATGCATCTAAAAATGGGAACCCTGATCACATTGCAGCACAGACATTCTCATTCCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCTGAATGTCTTTTGGGAGAAGGAGGCTTTGGTAGAGTATACAAAGGGCGTTTGGAAAGCATTAATCAGGTTGTTGCAATTAAGCAACTTGACCGAAATGGACTGCAAGGGAATAGGGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCATCCTAACCTTGTAAACCTTATTGGTTATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATATATGTCATTAGGATCCTTGGAAGACCACTTGCATGATATTCCTCCTGGCAAGAAACGACTGGACTGGAACACGCGAATGAAAATTGCTGCTGGGGCAGCAAAGGGTTTGGAATATCTTCATGATAAAGCTAATCCTCCTGTCATCTACCGCGATCTAAAGTGCTCCAACATTTTGCTTGGTGAAGGGTATCACCCTAAGTTATCTGATTTTGGTTTGGCTAAACTTGGCCCAGTTGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAATTGACTCTAAAATCGGATGTTTATAGCTTTGGTGTAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAAATCAGCAGGAGAGCAGAATCTTGTTGCCTGGGCTAGACCCTTGTTTAAGGACAGAAGAAAGTTTTCACAAATGGCTGATCCAATGCTCCAAGGTCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGCGTTCAGGAGCAAGCTAACATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTTCACAAAGATATGATCCCAGTACACACTCAGTCCAAAGCTCTCGTCTCGCTCCTGCTACTCCTCCTAGAACCAGGAGAAGGCAATGA | 1140 | 0.4272 | MGWIPCSGYSGTKNKIEKMEVQDSLVGQIKATPGKLKRNSSKNSKDASKNGNPDHIAAQTFSFRELATATRNFRAECLLGEGGFGRVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLHDIPPGKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPSTHSVQSSRLAPATPPRTRRRQ | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02334 | 379 | Gene3D | Phosphorylase Kinase; domain 1 | 41 | 149 | - | - | |
Cca03g02334 | 379 | PANTHER | OS07G0668900 PROTEIN | 1 | 378 | - | - | |
Cca03g02334 | 379 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 102 | IPR017441 | GO:0005524 | |
Cca03g02334 | 379 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
Cca03g02334 | 379 | ProSiteProfiles | Protein kinase domain profile. | 73 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g02334 | 379 | Pfam | Protein tyrosine and serine/threonine kinase | 77 | 346 | IPR001245 | GO:0004672|GO:0006468 | |
Cca03g02334 | 379 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED | 1 | 378 | - | - | |
Cca03g02334 | 379 | CDD | STKc_IRAK | 79 | 347 | - | - | |
Cca03g02334 | 379 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 367 | - | - | |
Cca03g02334 | 379 | MobiDBLite | consensus disorder prediction | 360 | 379 | - | - | |
Cca03g02334 | 379 | MobiDBLite | consensus disorder prediction | 32 | 55 | - | - | |
Cca03g02334 | 379 | SMART | serkin_6 | 73 | 350 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca03g02334 | 379 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 347 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g02334 | Cca-Chr3 | 44295295 | 44298570 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02334 | 33 | 352 | Glycoside Hydrolase | AT3G07070 | 68.750 | 8.51e-166 | 468 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Cca03g02334 | PK_Tyr_Ser-Thr | 6.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02334 | - | - | gmx:100818024 | 712.605 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca02g02915 | 02 | 50661034 | 50665253 | Cca03g02334 | 03 | 44295295 | 44298570 | ECH | |
Cca03g02334 | 03 | 44295295 | 44298570 | Cca03g02334 | 03 | 44295295 | 44298570 | ECH | |
Cca03g02334 | 03 | 44295295 | 44298570 | Cca02g00882 | 02 | 24335719 | 24339620 | PCT |