Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02332 ATGGCAGCTGCAGGTGTTAGGATTCCACCCTTGACATCCACTTCCAACCCACCTCCACTTTTCGATGGAACTACAAGGCTGTACATCAGTTATACATGCCCGTATGCACAACGAGTATGGATTGCCTTCAATTTTAAGGGACTACAAGACAAGATCGAACTGGTTCCTATCGATCTTCTGAATAGGCCTACCTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTCATGGGAGAAAGCCTTGACTTGATCAAATATGTTGATGCCAACTTCGAAGGGCCATCTCTAGTTTCCACTGACCCTGCAAAGAAAGAATACGGGGAGCAATTGATATCTCACATTGATTCCTTGATGAAAGATATCTACGCCTCGTTCAAAGAAGAAGATCCTATGCAGCAGGCTGGTCCTTCTTTTGATTATTTGGAGAATGCTCTCGGGAAATTTGATGACGGACCCTTTTTTCTTGGCCAATTTGGTTTGGTGGATGCTGCCTTTGCTCCATTTGTTGAAAGGTTACAAATTACCTTTTCTGAGGTGTATAAGAATGACATCGTATCTGGGAGGCCAAAACTAGCAACATATATTGAGGAGCTGAATAAACTTGATGCTTATAAGATCACCAAAGTTGATCCTCAGGAGTTTGTCGAAATTTTCAAAAAATGGTTTTTGGCCCAACAATGA 708 0.4251 MAAAGVRIPPLTSTSNPPPLFDGTTRLYISYTCPYAQRVWIAFNFKGLQDKIELVPIDLLNRPTWYKEKVYPENKVPSLEHNGKVMGESLDLIKYVDANFEGPSLVSTDPAKKEYGEQLISHIDSLMKDIYASFKEEDPMQQAGPSFDYLENALGKFDDGPFFLGQFGLVDAAFAPFVERLQITFSEVYKNDIVSGRPKLATYIEELNKLDAYKITKVDPQEFVEIFKKWFLAQQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02332 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 234 IPR044629 GO:0004364
Cca03g02332 235 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Cca03g02332 235 Gene3D Glutaredoxin 2 101 - -
Cca03g02332 235 SFLD Glutathione Transferase (cytosolic) 26 208 IPR040079 -
Cca03g02332 235 PANTHER GLUTATHIONE S-TRANSFERASE TAU 5 234 - -
Cca03g02332 235 SFLD Main (cytGST) 26 208 - -
Cca03g02332 235 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Cca03g02332 235 Pfam Glutathione S-transferase, C-terminal domain 141 205 - -
Cca03g02332 235 SUPERFAMILY GST C-terminal domain-like 100 231 IPR036282 -
Cca03g02332 235 Gene3D - 102 235 - -
Cca03g02332 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02332 Cca-Chr3 44288023 44290883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02332 7 232 Glutathione S-transferase Gene Family AT5G02790 63.717 7.60e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02332 K00799 - gmx:100793025 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02332 03 44288023 44290883 Cca03g02332 03 44288023 44290883 ECH