Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02313 ATGAATATGAATGTACTATCTTGCAAGGAATGTGAACCCACTAACTCAAATTGGAAGAAGGAAGAGATGAGCTCCTGTTCACGACCGAGTATTATGCATGTGGGCTCATCAAGAAGAAGAAGCAACCCCGCTTCTTCTTCTATATATATATATACACTTAACTCCACTTCTAACATCCAACCAAAAATGAGAAAGTTGTGTTTCAACCCCAAAACGCCGTCGTTTGCCATGGAGCGCAATTCTCCCTCAAGCTCAAAGTCAACCCCAACGCCTCCGCGGCTCAGCTATTCGGAGGAAGATAGCTTCATGGAGGAGGCGGAGTCACTCATACTGAAATGGAACGCAGACACTTCCGCATACGCTAAAGTCACTTCCCTCTTCTACGAGGACAAGACCGAAGCCAAAAACTACATAAACTGCGTTAACCAACTTCAGAACACCATGCATTCCTTAATCTCCACAAACCCTTCCTCCCACAAACTCGTCCTCGCTCAAAACCTAATGCAGATCGCCATGAAGCGCCTCAAGAAAGAGTTCTACCAGATCCTATCCACCAACCGCGCTCACCTCGACCCCGAATCCCTCTCCGCCAGATCCTCCCGCACCTCCGCCACCTCCAGCGCCTCcgactgcgacgacgaagacgacgacATCCGCGCCGCCGCAGACTCCATCTCCGAGGTCGAGCAGGTTTCCTCCGCCGCCGTCGCCGATCTCAAACTAATCGCCCACTGCATGCTCTCTTCCGGCTACGCCAAAGAATGCGTCAGCGTCTACATCATCATCCGTAAATCCATCATCGACGAAGGAATCTACCGCCTCGGCGTCGAGAAATTAAGCTCCTCCCGCGCCAACAAGATGGACTCGGAGGTTCTTGATTTCAAGATCAAGAGTTGGTTAGAGGCGGCCAGGATTTCAGTTAGAACGCTCTTCAACGGAGAGAGAATCCTCTGCGACCACGTCTTCGGTTACTCAGATTCCATCAGAGAATCATGCTTCGCCGAAATTTCAAGAGACGCTGCCTCTCTCCTCTTCGGATTCCCCGAACTCGTCGCCAAAACAAAGAAATACTCACCGGAGAAGCTCTTCCGCGTGCTCGACATGCACGCCGTCGTTTCCGAGCTCTGGCCGGAGATCGAGTCTATTTTCTCCTCCGACTACACCTCCGCCGTTCGCTCTCAAGTCCTCGCCTCGCTTCAACGACTCACCGATTCCGCGCAAAACTCGCTCGCGGAGTTCGAGTCCACGATCCACAAAGACTCTTCCAAGTTGGCGCTGAACGGCGGCGGCGTGCACTGGCTCACGATTCAGACGATGAATTACCTCGCGATTCTCGCCGATTACGTGAACGTCCTCTCCGACATATTCCCGCGCGCGGACTGGCTTCCGCCGCCGCGTTCGTCGTCGCTGCCGGAATCTTATTTATACAGTCCAGAATCGGATTACTCGGCGTCGACGCCGGCGCTGACGGCTCGCGTGGCGTGGCTGATTCTCGTACTGCTGTGCAAGCTGGACGGCAAAGCAAGGCATTGCAAGGACGTTTCGCTGTCGTACCTGTTTCTGGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCGCGAAGCACGAAGCGAAAGCGAAAAGGTTCGTTGCGAACTACGAGAAGGTGGCGTGGGGAGAAGTTGTTTCGTCGCTGACGGTAAATCCTGGCGCGGCGGAGGCGAGAGAGGTGTTTGAGAAGTTCAACGCGAAATTCGAGGAAGCGTATCGGAAGCAGAACTCGTTCGTGGTGGCTGACAGAGACATGCGAGACGAAATAAAGGGCTCGATCGCGAGAAGTATAGTGCCGAGATATCGCGAGTGGTACGATGCGGTGCTTGCCACGGTGGGATCAGTGAGGGACTTGACGGTGACGGAGTACGTTACGTTTACCCCTGAGGATGTTGAAAATTACGTGGCTAACCTCTTCTTTTTTGGAACGGCGTCCTCATCGGTAACTTCGTCCCCTCACCGGCGTTGGAGTTAA 2046 0.5279 MNMNVLSCKECEPTNSNWKKEEMSSCSRPSIMHVGSSRRRSNPASSSIYIYTLNSTSNIQPKMRKLCFNPKTPSFAMERNSPSSSKSTPTPPRLSYSEEDSFMEEAESLILKWNADTSAYAKVTSLFYEDKTEAKNYINCVNQLQNTMHSLISTNPSSHKLVLAQNLMQIAMKRLKKEFYQILSTNRAHLDPESLSARSSRTSATSSASDCDDEDDDIRAAADSISEVEQVSSAAVADLKLIAHCMLSSGYAKECVSVYIIIRKSIIDEGIYRLGVEKLSSSRANKMDSEVLDFKIKSWLEAARISVRTLFNGERILCDHVFGYSDSIRESCFAEISRDAASLLFGFPELVAKTKKYSPEKLFRVLDMHAVVSELWPEIESIFSSDYTSAVRSQVLASLQRLTDSAQNSLAEFESTIHKDSSKLALNGGGVHWLTIQTMNYLAILADYVNVLSDIFPRADWLPPPRSSSLPESYLYSPESDYSASTPALTARVAWLILVLLCKLDGKARHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWIAKHEAKAKRFVANYEKVAWGEVVSSLTVNPGAAEAREVFEKFNAKFEEAYRKQNSFVVADRDMRDEIKGSIARSIVPRYREWYDAVLATVGSVRDLTVTEYVTFTPEDVENYVANLFFFGTASSSVTSSPHRRWS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02313 681 MobiDBLite consensus disorder prediction 75 99 - -
Cca03g02313 681 Pfam Exo70 exocyst complex subunit 297 659 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca03g02313 681 MobiDBLite consensus disorder prediction 75 95 - -
Cca03g02313 681 MobiDBLite consensus disorder prediction 193 215 - -
Cca03g02313 681 SUPERFAMILY Cullin repeat-like 104 663 IPR016159 -
Cca03g02313 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 671 IPR004140 GO:0000145|GO:0006887
Cca03g02313 681 Coils Coil 396 416 - -
Cca03g02313 681 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 63 671 - -
Cca03g02313 681 Gene3D Exocyst complex component Exo70 116 670 - -
Cca03g02313 681 MobiDBLite consensus disorder prediction 193 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02313 Cca-Chr3 44101950 44104624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02313 103 663 EXO70 exocyst subunit family AT3G09520 53.846 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02313 K07195 - gmx:100786852 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02313 03 44101950 44104624 Cca02g00204 02 4207979 4222765 PCT
Cca02g00905 02 24738065 24740397 Cca03g02313 03 44101950 44104624 PCT