Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02305 ATGCTTATGTTATATATACACTTCTCTAAAATTGTTTTCTTGTTGTTTGCAGACAAAATTCTCGGTAAAATGGGTGAAGGAACTTTTGGCCAAGTTTTGGAATGTTTTGACAATGAAAAGAAAGAATTTGTGGCAATTAAGGTTGTTCGCTCCATAAATAAGTATCGTGAAGCTGCAATGACTGAAATTGATGTCTTGATGAGGCTAGCCAGACATGATGTTGATGGTGCACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATATGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCTATTGATCTTGTTCGGGAGCTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGATTTATGCTTGATTCACACTGATTTGAAGCCAGAGAATATTCTTCTTGTCTCGTCAGAATTCATTAAAGTGCCAGACTATAAGTTTCTATCACGGTCCACAAAAGATGGCTCCTATTTCAAGAACCTACCCAAGTCAAGTGCTATTAAACTAATTGATTTTGGGAGTACAACATTTGAACATCAGGATCACAGTTATGTTGTGTCAACAAGACACTATCGTGCGCCAGAAGTAATCTTAGGCCTTGGGTGGAACTATCCTTGTGATATTTGGAGTGTGGGCTGCATACTGGTTGAGCTTTGCTCTGGAGAAGCACTTTTCCAAACACATGAGAACTTGGAACATCTTGCCATGATGGAGAGAGTTCTAGGGCCACTACCACCCCATATGGTGGTCAGGGCTGATCGTCGAGCTGAAAAGTATTTTAAAAGAGGTGCACGACTAAGTTGGCCTGATACTTCAACTTCAAGAGAAGGCATGAGAGCAGTTTGGAAATTGCCGCGTTTGCCGAACCTTATAATGCAGCATGTTGACCATTCTGCTGGTGATCTGATTGACCTGTTGCAAGGGCTCCTGAGGTATGACCCTTCAGAACGGCTTAAAGCTAAGGAAGCACTGAGACACCCCTTCTTCTTCACAGGAGATATTAAAAGATACGGCTACCCTTTATAA 1077 0.4085 MLMLYIHFSKIVFLLFADKILGKMGEGTFGQVLECFDNEKKEFVAIKVVRSINKYREAAMTEIDVLMRLARHDVDGARCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLCLIHTDLKPENILLVSSEFIKVPDYKFLSRSTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAEKYFKRGARLSWPDTSTSREGMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLKAKEALRHPFFFTGDIKRYGYPL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02305 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Cca03g02305 358 ProSiteProfiles Protein kinase domain profile. 18 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02305 358 Gene3D Transferase(Phosphotransferase) domain 1 72 346 - -
Cca03g02305 358 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 19 346 - -
Cca03g02305 358 PANTHER BNAA07G37640D PROTEIN 19 346 - -
Cca03g02305 358 SMART serkin_6 18 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02305 358 Pfam Protein kinase domain 21 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca03g02305 358 Gene3D Phosphorylase Kinase; domain 1 19 98 - -
Cca03g02305 358 CDD PKc_CLK 19 346 - -
Cca03g02305 358 SUPERFAMILY Protein kinase-like (PK-like) 20 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02305 Cca-Chr3 44022428 44027560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02305 21 346 Core Cell Cycle Gene Families AT1G76540 27.139 4.44e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Cca03g02305 Pkinase 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02305 K08287 - gmx:100808061 668.307