Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02299 ATGCTACATGTTTTTAACAGGAAAGAAAGGCCTAAGATGACATTTTCAATCTTCATGAAGATAATGGTTCTCAGCCTGCTAGAGCCAGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCCGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTCTCATGGCTTGGATTCTTAGGCTTGAGAAGGTAAAACTAAAAAGTGCACGCAGTCAAGCAAAGGTGGTGGGGACTTTAGCCACTGTTGCAGGTGCCATGGTCATGACACTGATAAAGGGCCCAGTACTTGACCTTTTTGGAACAAACGGAAGCAATTCCCACAACCAGCAAAATGGTGGGGTAAATCTTCAACATGCAATAAAGGGATCAATAATGATCACAATTGGCTGCTTTAGTTGTGCATGTTtcatgattctccaaGCTATTACCATTGAAGCCTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGAACAGCTGAAGGTGGCATAGTTGCCCTGATTATGGAAAGGAAAAATCTTTCAGCTTGGTCTTTGCAATGGGATACAAAATTGCTGGCTGCTGTCTACAGTGGCATAGTTTGCTCAGGAATGGCTTATTACATCCAAGGAGCAGTGATGAAAGATAGAGGCCCGGTCTTTGTAACAACTTTTAACCCTCTCTGCATGGTCATTGTGGCTGTCATGGGCTCCTTCTTTCTGGCTGAAGTAATGTACCTTGGGAGGGCAATCGGAGCTATTGTAATTATTTTAGGGCTGTATCTTGTGATTTGGGGTAAAAGTAATGACTACGAGTCATCAAGTACAGATACTAAAGAGCCTGTATTGCCAGCGAAGCAAACAATAGATGAGAGCAACGGCAAAGATGAGCATTCTAATTACCAGGTCGTTACTATCAATAACTTAGGCGCAGGAAACATAGAACGAGATGAACAAGTATGA 972 0.4198 MLHVFNRKERPKMTFSIFMKIMVLSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFLMAWILRLEKVKLKSARSQAKVVGTLATVAGAMVMTLIKGPVLDLFGTNGSNSHNQQNGGVNLQHAIKGSIMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGTAEGGIVALIMERKNLSAWSLQWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVFVTTFNPLCMVIVAVMGSFFLAEVMYLGRAIGAIVIILGLYLVIWGKSNDYESSSTDTKEPVLPAKQTIDESNGKDEHSNYQVVTINNLGAGNIERDEQV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02299 323 PANTHER WAT1-RELATED PROTEIN 4 293 - -
Cca03g02299 323 PANTHER WAT1-RELATED PROTEIN 4 293 IPR030184 GO:0016021|GO:0022857
Cca03g02299 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 16 97 - -
Cca03g02299 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 186 271 - -
Cca03g02299 323 Pfam EamA-like transporter family 3 95 IPR000620 GO:0016020|GO:0016021
Cca03g02299 323 Pfam EamA-like transporter family 128 267 IPR000620 GO:0016020|GO:0016021
Cca03g02299 323 MobiDBLite consensus disorder prediction 276 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02299 Cca-Chr3 43937465 43941164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02299 5 313 Nodulin-like Gene Family AT2G37460 63.057 3.16e-142 405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02299 03 43937465 43941164 Cca03g02299 03 43937465 43941164 ECH
Cca03g02299 03 43937465 43941164 Cca02g00919 02 25004640 25010704 PCT