Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02289 ATGATGTTGAACGCGAGCGCCATCAAAACGGCGTCGGATGGAGTCTGGCAAGGCGATAATCCGCTGAACCACTCTCTGCCATTGTTGATCGTTCAAACCATGGTCGTTCTCTTCGTTAGCCGAACCCTTGCCTTTTTCCTCAAACCCCTTCGTCAACCCAAAGTTGTCGCCGAGATTATTGGTGGGATTTTGCTGGGACCTTCAGGTATTGGGCGCAACAAGAAATTCATGCAGACGGTGTTCCCATGGTGGAGCACTACCATGCTCGAATCTGTCGCAAGCTTTGGCCTCTTATTCTACCTTTTTCTCGTCGGTCTTGAGCTCGACCTCCGCACCATTCGCCGTAGCGGCAAGCGAGCTTTTAACATCGCGGTCGCCGGAATAACCCTCCCCTTCATCTTCGCCGTCGGAGTCACCTTCCTTCTCCAGAGAACCATCCGCTCTGAAAACCCTAACATTGGCTACATTCAGCACTTCGTCTTCTTGGGGGTTTCTCTCTCCATCACAGCTTTCCCTGTGCTCGCGCGCATCCTAGCGGAGCTCAAGATGCTCACCACACGTGTTGGAGAAACGGCCATGGCAGCTGCAGCCTTCAACGACGTCGCTGCCTGGGTTTTGTTGGCCTTGGCTGTCGCTTTGGCTGGTCAAGAACACAAAATCACCCTCTTGACATCAATATGGGTGCTCTTCTCAGGAGTGGCATTTGTTGGCGCCATGATGATCCTGGTTCGGCCGGTGATGAACCGGGTTGCTCGCAAGTGTTGCGGCGAACACGAAGTGTTACCCGAAACTTTTGTATGTTTAACCCTTGCGGGGGTAATGCTATCGGGGTTCGTGACGGATATGATAGGCTTGCATTCAATTTTTGGAGGATTTGTTTTCGGGCTAACGATACCAAAAGGGAGTGAATTTGCGAGCAAGTTAACGAGGAGAATTGAGGACTTTGTGTCCACGTTGATGCTTCCCTTGTACTTTGCTTCCAGTGGCTTGAAAACTGATGTGACCAAGTTACGTAGCATGCTGGATTGGGGGCTTCTTTTGCTGGTTACATCCACAGCGTGCGCCGGCAAGATTTTCGGAACGTTCGCGGTGGCGGTAATGTGTACGGTGCCGCTCAGGGAATCCTTGACGCTTGGAGTGTTGATGAACACCAAAGGCTTGGTAGAGCTAATCGTTCTCAATATTGGCAGGGAGAAAAAGGTTCTTAACGACGAGATGTTCACCATTCTGGTGCTCATGGCTCTCTTCACCACCTTCATTACAACTCCACTCGTCTTGGCTATATATAAACCTTCTACTGTAAACAACGGTTCGCAAAATCCGTCGCGGCTAACAGATTTGCAAGAGAAGCTTCGCATTCTTGCTTGCATCCATGGAACTAGCGACATACCCTCTTTAATAAACTTCATTGAATCTATTCGTGCCACCAACATGTCTCGGCTGAAACTATACGTGATGCAACTTACTGAACTCACTGATAGCTCGTCCTCCATCTTGATGGTTCAACGCAGCAGAAAGAATGGTTTTCCCTTCATCAACCGACTCAAAAGGGGAGCGATGCATGAGCAAATCGCCATAGCATTCCAGGCATATGGTGAAGTGGGTCAGGTTACTGTGCATCATTTGACATCCATATCTTTGTTGTCAACCATGCACGAGGACATATGCCATGTTGCAAAAAAGAAAGGTGTGGCAATGATCATATTGCCGTTCAACAAAAGGTGGGGAGGGGAAGGTGAAGAAGTGACAGAAGACTTAGGTCAGGGTTGGAGGGAAGTCAATCAGAGGGTGCTTCAAAATGCACCCAGCTCTGTTGCAGTTCTAGTTAAGCGTGGGGGTGGCAGAAGGTACGAACAAGGACCACAGACCAGTGTTGCTGCAAGGAAAAGGGTGTGCATAATTTTCATTGGTGGACCAGATGATCGCAAGGTTTTGGAGTTAGGTAGCAGAATGGCTGAGCATCCAGCAATTGGGCTACTTTTTGTAAGATTCACTTCATGCAAAGAAACGGAGGACGAGAGACGCAACCACAACTCACCAATATCCACTAACAACTGGGAAAAAGAGAAGGAGTTGGATGAGGAAGCAGTGAACGAGTTCAAGGCTAAATGGCAGGAATCAGTGGAGTACATTGAAAAGAACACAACCAACATAACAGATGAGGTGTTATCAATTGGGGAAGGTAAAGATTACGACCTAGTAATTGTGGGGAAGCAACAACAGCTTGAGTCAACCATGATGACAAACCCAGATTTTCGCCCCGAGCATACCGAGCTGGGACTCATTGGAGATCTCTTTGCCTCTTCGAGCGGCATTACCAGTTCATTGCTCGTTATACAGGACCGGCATTTGATAAATCCAAACGAAAGTACTCTCGTTAAGACAGCAACGGCCAAGAATACTGTGATTAACAGTACCATCTGA 2424 0.4843 MMLNASAIKTASDGVWQGDNPLNHSLPLLIVQTMVVLFVSRTLAFFLKPLRQPKVVAEIIGGILLGPSGIGRNKKFMQTVFPWWSTTMLESVASFGLLFYLFLVGLELDLRTIRRSGKRAFNIAVAGITLPFIFAVGVTFLLQRTIRSENPNIGYIQHFVFLGVSLSITAFPVLARILAELKMLTTRVGETAMAAAAFNDVAAWVLLALAVALAGQEHKITLLTSIWVLFSGVAFVGAMMILVRPVMNRVARKCCGEHEVLPETFVCLTLAGVMLSGFVTDMIGLHSIFGGFVFGLTIPKGSEFASKLTRRIEDFVSTLMLPLYFASSGLKTDVTKLRSMLDWGLLLLVTSTACAGKIFGTFAVAVMCTVPLRESLTLGVLMNTKGLVELIVLNIGREKKVLNDEMFTILVLMALFTTFITTPLVLAIYKPSTVNNGSQNPSRLTDLQEKLRILACIHGTSDIPSLINFIESIRATNMSRLKLYVMQLTELTDSSSSILMVQRSRKNGFPFINRLKRGAMHEQIAIAFQAYGEVGQVTVHHLTSISLLSTMHEDICHVAKKKGVAMIILPFNKRWGGEGEEVTEDLGQGWREVNQRVLQNAPSSVAVLVKRGGGRRYEQGPQTSVAARKRVCIIFIGGPDDRKVLELGSRMAEHPAIGLLFVRFTSCKETEDERRNHNSPISTNNWEKEKELDEEAVNEFKAKWQESVEYIEKNTTNITDEVLSIGEGKDYDLVIVGKQQQLESTMMTNPDFRPEHTELGLIGDLFASSSGITSSLLVIQDRHLINPNESTLVKTATAKNTVINSTI 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02289 807 Gene3D - 28 435 IPR038770 -
Cca03g02289 807 PANTHER CATION/H+ EXCHANGER 3 8 797 - -
Cca03g02289 807 Pfam Sodium/hydrogen exchanger family 35 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca03g02289 807 PANTHER CATION/H + ANTIPORTER 8 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02289 Cca-Chr3 43839242 43844433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02289 76 804 Antiporter Super Family AT3G53720 56.380 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02289 - - gmx:100799165 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02289 03 43839242 43844433 Cca03g02289 03 43839242 43844433 ECH