Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02276 ATGAATGGGGTGCAGAACAGGAGGGTTCACAATGTGGAGAAGCCTTTTCCAGGGTGCCTGGGAAGAATGGTGAACCTCTTTGACTTGACTGGGGGTGTGAACGGGAACAAGCTGCTCACGGACAGGCCTCATCGTGATGCATCTTCACTTTCAAGAAGTCAATCGGATGTTGCAAGAATCATGAATCCTCCATTGGGTGATCAGATAGAGGATAAACTGATTGTTTCCGACTCGATGAGAGCTTCTTCAAATAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAATTTGTTTCGCAGCACAATCCACCACCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCCTCCCACAGGGTGAGCCTAATTTTTCTGTGGAGAGAAGCCACAGAGGAGAGTATTCTCAGCATATGTGTGGTAATTCAGGGACACCGTTCAAACACTGGCAGCAGGACGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACAGATTGCTTATAAAGATATTTATGAAATATGGCTGCAATCGCAAAGAACAAGCAATGCAAGAGACAAGACACCGGAGAGAGAAAAGTGGAGTGAAGATGTTAATGGGAAGAAAATGGCTCTCATTCGCCAGAAATTTATGGAAGCAAAACGTCTTTCTACAGATGAGAGACTACGCCAATCCAAGGAGTTTGAAGATGCCTTGGAAGTTTTAAGTTCCAATAATGATCTATTAATCAGATTATTGGATTCTCAAAATCTTTATGAACTTCAGTCTACCCCAGTAGCGGAGACCAAGCGCATTACTGTTCTTAAACCTTCGAAGATGGTTGACAATGAAAAATCTGGTGGAAAGGGGAAGAGAAATGACAAGCAGATTAAGAAACCAGCAAATGTTGGTGCTGCATGGGAGAAATGCAGTCCTGAATACGCTCCTGCCATTCAGAATGTTGATGAGTTTCCAGTTCAACCTACTCGAATAGTGGTATTGAAACCTAGCCCTGGGAAGACACATGAAATTAAGGCTGTGGTTTCTCCAACAATGTCATCACCTCGAAATCTACAAAGTGGAAATTTCTATCAGGAACCTGAAGATGATGATGTACTTGAATCAAGAAAAGTGGCGAGTGAAATTACACACCAAATGCATGAAAATCTGAGGAGCCATCAAAGAGATGAAACATTGTATTCTGTATTTTCCAATGGCTATACTGGTGACGAGAGTTCATTCAACAAATCAGATCCTGAGTATACTGCAGAGAACTTGAGTGATTTGGAAGTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATTAATCGCTGTGGCAGTCCTTTTTCTTCATCATCCTTCAGCCGTGCTTCCTGTTCTCCTGAGTCATCAGTATGCAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAAATAAGGGTCCTCAAGAGCAAAGGCATATGCGTAGAAGCTCTACCTTGGGCGAGATGCTTGCTCTTTCGGATATAAAGAAATCTGTAATATCTGAGCTTGAGGGTATTCATAAAGAACAGGAGCCAAGTGAATCTGTTTCTTGTAGTCGAAATTTTAATGCTGAAACATGTGTGGATGGTTCTCCTAAAACCCTTTCTAGGTCAAAATCTGTTCCGACATCTTCTACTGTCTATGAAAATGGGCTTAATGTTGAAGTTGGTAATGATGCTGGCAGAGCACATGGGTCAGGGGAACTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTGACAAGTTTCTTCTTCTCAAGGAATAAGAAACCAACCAGGGAAAAATCTTGTCTATCTCAATCTAAAAATGATTGCCAATCTTCTCTTACTGAAGCAGCAGGTTCTCCAGTGAATTCATCTGGTGTCCTTAGGGATGATGCGTCTCAAAGCTTCATTGGTGGATCTATTGGAGAGTGTTCTCTTCCAGCCCCATATGAATCATCAGGCAAAATTTTATCAGATTCTAGTTCTAGCGGACAAGGTGTTATATCTGTCGAGCCTGGATTGACTCTGTCAAAGTCCACGGTGCCTGGGATTTCATGTGAAAACCAGGGTCAGCCCAGTCCAATATCAGTTTTAGAGCCTCCATTTGAAGATGATAATGCTGCTAACGAGTCCTTGGGCTGTGTGAAGGGTGGTCAGCTGGGATCACGGGTGCCTTTGAAGTCTAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTCGGACCCTCTCATGGGATGACTCTGGTGCAGAGGTAGCAAGTCCATACCCGTTAAAACCCTCGTTGGTTTCCTTGGACGCCAAGGTAGAGGATCAGGACTGGCTTGTATTTGTGGAGAAACTACTGTCAGCTGCTGGAATTGATGATCAAGTGCAGTCTGACTCGTTTTACTCAAGATGGCATTCCCTTGAAAGCCCATTGGATCCATCATTGAGGGACAACTATGCCAATCTCAATGACAAGGAGCCTCAGCAACTCCATGAGGCCAAGCGAAGGCAGAAGAGATCTAATCAGAAGCTTGTATTTGATTGTGTCAATGTTGCACTAATAGAAATTACTGGTTATGGATCAGAGAGTTACTTGATGGGTAGGTTGTGGAGTGGGAGCCACAGCAGGCTCCAAGTCCCAGAAGGTGCACCTCCCCCATTGGTGGACGTCATTGTGGCCCAGATGAAGGTGTTAATATCTAGTGCTATAAGGCCTGTTTGGGGGGATTGTGGGGACACTAACAGCCTGGTGTTAGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGCTTATGGGACTGGAGATGGATATTCTGATGAAGGAAGTAGAGGGGAAGTTGCTAGAAGAGCTTGTGGAGGATGCGGTGGTTGATTTGACCGGCAGGGCCTGA 2940 0.4378 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARIMNPPLGDQIEDKLIVSDSMRASSNKKINGTPIKMLIDQEMSKEFVSQHNPPPNVVAKLMGLEALPQGEPNFSVERSHRGEYSQHMCGNSGTPFKHWQQDDRFMDKEMLHEVHPSTEQIAYKDIYEIWLQSQRTSNARDKTPEREKWSEDVNGKKMALIRQKFMEAKRLSTDERLRQSKEFEDALEVLSSNNDLLIRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNEKSGGKGKRNDKQIKKPANVGAAWEKCSPEYAPAIQNVDEFPVQPTRIVVLKPSPGKTHEIKAVVSPTMSSPRNLQSGNFYQEPEDDDVLESRKVASEITHQMHENLRSHQRDETLYSVFSNGYTGDESSFNKSDPEYTAENLSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASNKGPQEQRHMRRSSTLGEMLALSDIKKSVISELEGIHKEQEPSESVSCSRNFNAETCVDGSPKTLSRSKSVPTSSTVYENGLNVEVGNDAGRAHGSGELTKSKSMKSSFKGKVTSFFFSRNKKPTREKSCLSQSKNDCQSSLTEAAGSPVNSSGVLRDDASQSFIGGSIGECSLPAPYESSGKILSDSSSSGQGVISVEPGLTLSKSTVPGISCENQGQPSPISVLEPPFEDDNAANESLGCVKGGQLGSRVPLKSNLIDKSPPIESIARTLSWDDSGAEVASPYPLKPSLVSLDAKVEDQDWLVFVEKLLSAAGIDDQVQSDSFYSRWHSLESPLDPSLRDNYANLNDKEPQQLHEAKRRQKRSNQKLVFDCVNVALIEITGYGSESYLMGRLWSGSHSRLQVPEGAPPPLVDVIVAQMKVLISSAIRPVWGDCGDTNSLVLESVVRKEVVGKGWVELMGLEMDILMKEVEGKLLEELVEDAVVDLTGRA 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02276 979 Pfam Protein of unknown function (DUF3741) 219 262 IPR022212 -
Cca03g02276 979 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 978 - -
Cca03g02276 979 Pfam DUF761-associated sequence motif 111 126 IPR032795 -
Cca03g02276 979 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 978 - -
Cca03g02276 979 Pfam Domain of unknown function (DUF4378) 792 970 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02276 Cca-Chr3 43688271 43692794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02276 1 976 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.821 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02276 - - gmx:100816611 1679.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02276 03 43688271 43692794 Cca03g02276 03 43688271 43692794 ECH
Cca03g02276 03 43688271 43692794 Cca02g00946 02 25523630 25527321 PCT