Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02259 ATGGAATTGAGTGCACTTGTTGTAGAAGGCGATGCGAACGTACGAAACGTTCATAAGGATCTGTTGAGATTAGTTGGGAATTGTACTACTGTGAACAGTGGCTTGCAAGCTGTGATCCTTCATCGCATGGGTAAAAGATTTGACGTCATTCTCATGGACATGGACTTGCCTCAACTTGAAGGAATTAGGGCAACAAATGAACTTCGTGTAATGGGGGTTCGTAGCTTGATTTTGGGTATGTCGAGATCATGCAGTAAAGAGGAAGTGCGAAGTCGGGAAAGAATAATGGTGGAAGACGCCATAGATGTCCACTACACGAAACCCTTGACCGCTGAACAGCTTGAAGAAGCTCTTGAAATGTTAGATTCATGA 372 0.4382 MELSALVVEGDANVRNVHKDLLRLVGNCTTVNSGLQAVILHRMGKRFDVILMDMDLPQLEGIRATNELRVMGVRSLILGMSRSCSKEEVRSRERIMVEDAIDVHYTKPLTAEQLEEALEMLDS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02259 123 Gene3D - 1 123 - -
Cca03g02259 123 SMART REC_2 3 118 IPR001789 GO:0000160
Cca03g02259 123 SUPERFAMILY CheY-like 4 119 IPR011006 -
Cca03g02259 123 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 122 - -
Cca03g02259 123 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 122 - -
Cca03g02259 123 Pfam Response regulator receiver domain 6 118 IPR001789 GO:0000160
Cca03g02259 123 ProSiteProfiles Response regulatory domain profile. 4 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02259 Cca-Chr3 43490372 43491199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02259 3 114 Response Regulator Gene Family AT3G04280 34.211 5.64e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca03g02259 Response_reg 3.4e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02259 - - ccaj:109803786 100.138