Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02257 | ATGGAAGGCCAAAGCAGCAACAAACGCAAAGCGATAGCTGAACCTGAGTGGGACTATGAATTCAGTGCACTTGTTGTAGAAGAAGATGCGGACGTGAGAATGGCTCACAAAGAGATTTTGACATTAGTTGGGGCGAGAACTTGTGATACTGTAGGAAATGGCCAAGAAGCCGTGAACCTTCATCTCAATGGCAAAACATTTGATCTCATTCTCATGGATTTTGACATGCCTGGTGGTGATGGATTTGTGACAACAAATAAGCTTCGTTCAATGGGGGTTCATAGCTTGATTTTAAGTGTGTCGGGACCGTGCTCTCAAGATACTGTGCAAAGATTTTTGAAGGAAATCCCGATAGATGGCCACTATATCAAACCCTTGACTGTTCAGATGCTTCAAGAAGCTCTTCAAAAGCTAAACTTAAAGCCATGA | 429 | 0.4289 | MEGQSSNKRKAIAEPEWDYEFSALVVEEDADVRMAHKEILTLVGARTCDTVGNGQEAVNLHLNGKTFDLILMDFDMPGGDGFVTTNKLRSMGVHSLILSVSGPCSQDTVQRFLKEIPIDGHYIKPLTVQMLQEALQKLNLKP | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02257 | 142 | CDD | REC_hyHK_CKI1_RcsC-like | 24 | 135 | - | - | |
Cca03g02257 | 142 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 15 | 140 | - | - | |
Cca03g02257 | 142 | Gene3D | - | 7 | 141 | - | - | |
Cca03g02257 | 142 | SMART | REC_2 | 21 | 135 | IPR001789 | GO:0000160 | |
Cca03g02257 | 142 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR 24 | 15 | 140 | - | - | |
Cca03g02257 | 142 | Pfam | Response regulator receiver domain | 24 | 135 | IPR001789 | GO:0000160 | |
Cca03g02257 | 142 | ProSiteProfiles | Response regulatory domain profile. | 22 | 139 | IPR001789 | GO:0000160 | |
Cca03g02257 | 142 | SUPERFAMILY | CheY-like | 22 | 138 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g02257 | Cca-Chr3 | 43481424 | 43482376 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02257 | 21 | 127 | Response Regulator Gene Family | AT3G04280 | 39.815 | 4.08e-17 | 71.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Cca03g02257 | Response_reg | 1.2e-14 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02257 | - | - | ccaj:109803786 | 182.57 |