Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02182 ATGGCCGAGCACAACCTGGCCGATCTCCCCCTAGACAAGCACAACCTGGCCGATCTCACCATGGCCGAGCACACCCTGACCGATCTCACCACGGCCGAGCACAGCCTGGCCGATCTCACCATGACCGAGCGCACCCTGGCCGACcatacccaggccgagctcgtccagggggtggGTTTGAAGAAGAAAGAGACAACTCCCACAAGAAGCATCACCCTCCCAAAAGTATACCCACTTATTGGTTCCTACTTAGCCATCAAAGCCGTCGGTAACCACCGTACCCAGTGGCTTTCCGACATGGTCAAAATCTCACCCACGGCAACCTTCACCTTCCACCGCCCCTTGGGCCGCCGGCATGTCTTCACCGGAAACCCCGCCACCGTAGAGTACATTCTTAAGTTCCGTTTCACCAATTACCAAAAGGGAAGCACTCCTACTCACACTCTCTCCGATTTCCTCGGCACGGGGATCTTCAACGCCGACGGTGACACGTGGAAGTTTCAGAGGAAAGTGGCCAACCCCGAGTTCAACACAAAGTCTCTTCGCAAGTTCATTGAACACGTGGTTGACACCGAGCTCTCGGATCGTCTCCTCCCCATCCTCGCTTCGACGGCAGCAACACAAGACCAAACCCTAGATTTCCAAGACATTCTCCAACGCTTCGCCTTCGACAACATCTGCAAAATCGCATTTGGCTTCGACCCCGAGTACCTGACACCGTCAGTTGAACGGAGCAAGTTTGCGCAAGCATTCGAAGAAGCTACGGAGATCAGCAGCAAACGGTTCAGGGATCCGTTTCCGTTAATCTGGAAAGTCAAGAGGGTGCTTAACATAGGTTCGGAAAAGCGATTGCGAATGGCAGTGAGGGAAGTGCACGAGTTCGCGAAGAAGATAGTGAGAGAGAAAAGAAGGGAGCTGAAGGAGAAGGCCTCGCTTGAATCGGTGGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCCGACGAGGACTTCGTGACGGACATAGTTATAAGTTTCATAGTAGCCGGGAAGGACTCGACGTCGGCGGCGCTGACGTGGTTTTTCTGGCTGCTGTGGAAGAACCCGCACGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCAGAGGCTCCAGTGTACGATGAAGTGAAGGATATGGTTTACACGCACGCGGCGTTGTGCGAGAGCATGAGGTTGTACCCGCCGGTGCCTTTAGACACTAAGGAAACAGTGGAGGACGACGTTTTGCCAGATGGGACACCGATGAAGAAGGGGATGATGATAACATATCACGTAGATTCTTTCACTTATCCAGTATTTCAGGCAGGTCCTAGGGTTTGTTTGGGCAAGGAAATGGCTTTTATGCAAATGAAGAGATTGGTGGCTGGCATTCTCAGGCGTTTCACGGTGGTTCCGGAGGCGACCCCTGGGGTAGAGCCTCACTACACTTCCTTCTTGACTTCCCAGATGGAAGTGAGGGAAGTGCACGAGTTCGCGAAGAAGATAGTGAGAGAGAAAAGAAGGGAGCTGAAGGAGAAGGCCTCGCTTGAATCGGTGGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCCGACGAGGACTTCGTGACGGACATAGTTATAAGTTTCATAGTAGCCGGGAAGGACTCGACGTCGGCGGCGCTGACGTGGTTTTTCTGGCTGCTGTGGAAGAACCCGCACGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCAGAGGCTCCAGTGTACGATGAAGTGAAGGATATGGTTTACACGCACGCGGCGTTGTGCGAGAGCATGAGGTTGTACCCGCCGGTGCCTTTAGACACTAAGGAAACAGTGGAGGACGACGTTTTGCCAGATGGGACACCGATGAAGAAGGGGATGATGATAACATATCACGTATGGAAGGTGGTTTTCCGGTTAACATCCTCCAAAGGTTCCCGTAAAAAACATCCCACGTTCTTTGAACAAGATTCCCGCCATAAAGTTCGTAACGGTGGGAGACGACCTCAACCACCGCAACCTCACCGACCTGGCGAAGAAGTTCGACGACATCTTCCTCCTCCGCATGGGGCAGCGGAACCTGGTGGTGGTGTCGTCGCCGGAGCTGGAAAAAGAGGTGCTGCACACGCAGGGCATGGAGTTCGGGTCCCACACGTGCAACGTGGTGTTCGAAATCTTCACTGGGAAGGGCCAGGACATGGTCTTCACCGTTTACGGCGAGCACTGGCGCAAGATGCGCCGCATCATGACCGTCCCCTTCTTCACCAACAAGGTGGTGCAGCAGTACCGCCAGGGCTGGGAGGTCGAGGCCGCCGTCGTCGTCCACGACGTCCGCAACAACCCCAGAAGCTCAGAGCTCTTAATGGAGAAAGGAGTCACTTGGCGCAGAGCTTTGAATACAACACTCCATTCTTTGAGTTCGTACACTCCGTCAAGGCATCCTCGCCGATCAACTTCCTCGACGAGCACCGCTTCTTCTCCGATGCCGACGCTTCCGAGTATACAAAGATGGGGTTTGCCGGTAATGTTGAGCCATGTTTTATAGCAGACAGATTATGGAAGGCATGCTATGGATGGATATTGGCAACAACAGTGCTACCACAAGGATTGCTTCAAAATTTCTTCTAA 2643 0.5252 MAEHNLADLPLDKHNLADLTMAEHTLTDLTTAEHSLADLTMTERTLADHTQAELVQGVGLKKKETTPTRSITLPKVYPLIGSYLAIKAVGNHRTQWLSDMVKISPTATFTFHRPLGRRHVFTGNPATVEYILKFRFTNYQKGSTPTHTLSDFLGTGIFNADGDTWKFQRKVANPEFNTKSLRKFIEHVVDTELSDRLLPILASTAATQDQTLDFQDILQRFAFDNICKIAFGFDPEYLTPSVERSKFAQAFEEATEISSKRFRDPFPLIWKVKRVLNIGSEKRLRMAVREVHEFAKKIVREKRRELKEKASLESVDMLSRFLSSGHSDEDFVTDIVISFIVAGKDSTSAALTWFFWLLWKNPHVEKEIVKEIMEKSEAPVYDEVKDMVYTHAALCESMRLYPPVPLDTKETVEDDVLPDGTPMKKGMMITYHVDSFTYPVFQAGPRVCLGKEMAFMQMKRLVAGILRRFTVVPEATPGVEPHYTSFLTSQMEVREVHEFAKKIVREKRRELKEKASLESVDMLSRFLSSGHSDEDFVTDIVISFIVAGKDSTSAALTWFFWLLWKNPHVEKEIVKEIMEKSEAPVYDEVKDMVYTHAALCESMRLYPPVPLDTKETVEDDVLPDGTPMKKGMMITYHVWKVVFRLTSSKGSRKKHPTFFEQDSRHKVRNGGRRPQPPQPHRPGEEVRRHLPPPHGAAEPGGGVVAGAGKRGAAHAGHGVRVPHVQRGVRNLHWEGPGHGLHRLRRALAQDAPHHDRPLLHQQGGAAVPPGLGGRGRRRRPRRPQQPQKLRALNGERSHLAQSFEYNTPFFEFVHSVKASSPINFLDEHRFFSDADASEYTKMGFAGNVEPCFIADRLWKACYGWILATTVLPQGLLQNFF 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02182 880 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PANTHER CYTOCHROME P450 94A2-LIKE 66 433 - -
Cca03g02182 880 SUPERFAMILY Cytochrome P450 493 641 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 Gene3D Cytochrome P450 61 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 MobiDBLite consensus disorder prediction 755 788 - -
Cca03g02182 880 MobiDBLite consensus disorder prediction 651 723 - -
Cca03g02182 880 MobiDBLite consensus disorder prediction 678 692 - -
Cca03g02182 880 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 Pfam Cytochrome P450 434 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 Pfam Cytochrome P450 493 641 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 Pfam Cytochrome P450 74 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PANTHER CYTOCHROME P450 434 492 - -
Cca03g02182 880 PANTHER CYTOCHROME P450 492 639 - -
Cca03g02182 880 MobiDBLite consensus disorder prediction 653 669 - -
Cca03g02182 880 SUPERFAMILY Cytochrome P450 74 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02182 880 PANTHER CYTOCHROME P450 94A2-LIKE 434 492 - -
Cca03g02182 880 PANTHER CYTOCHROME P450 94A2-LIKE 492 639 - -
Cca03g02182 880 PANTHER CYTOCHROME P450 66 433 - -
Cca03g02182 880 Gene3D Cytochrome P450 490 647 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02182 Cca-Chr3 42431457 42447103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02182 441 636 Cytochrome P450 AT5G63450 40.758 1.62e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02182 K20769 K13407 gmx:100818732 711.449