Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02181 ATGTTTGAGATAAATCTGGATATGCAGCTATTAGcttctttcttcgtcttcttcacccttcccctccttttcttcttcttcttctCCAAGTCCCCAGATTTGAAAAAGAAAGAAGAAGCTCCTACAACCATCACTCTCCCAAAAGTATACCCACTCATTGGTTCCTACTTAGCCTTCAAAGACAACAGCAACCGCGACATCCAATGGCTATCCGATCTTGTCAAAATCTCACCCGCCGCCACTATCACCCTCCACCGCCCCTTGGGCCGCCGCCAAGTCTTCACCGGCAACCCCGCCACTGTAGAGCACATTCTCAAGAGCCGTTTCTCCAACTACAAAAAGGGAAACACCTTTATTAACACCCTCTCTGATTTCCTCGGCACTGGAATCTTCAACGCCGATGGCGACACGTGGAAGTTTCAGAGGCAAGTGGCCAGCCACGTGTTCAACACAAAGTCTCTTCGCAAGTTCATTGAACAAGTGGTCGACACCGAGCTCTCCGATCGTCTCCTCCCCATCCTCGCTTCAGCGGCAGCAACACAAGACCAAATTCTAGATTTCCAAGACATTCTCCAACGTTTCGCCCTCGACAACATCTGCAAAATCGCGTTCGGCTTCAACGCGGAGTACCTGACGCCGTCAGTTGAACGGAGCAAGTTCGCCGTGGCCTACGAAGAAGCCACGGAGATCAGCAGCAAACGGTTCCGCGAGCCGTTTCCGTTAATTTGGAAAGTGAAGAGGGTGCTTGACGTAGGTTCGGAAAAGCGATTGCGAATGGCAGTGAAGGAAGTGCATGAGTATGCGAAGAACTTAGTGAGAGAAAAGAAAAAGGAGCTGAAGGAGAAGGCCTCGCTTGAATCGGAGGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCCGATGAGGACTTCGTGACGGACATAGTTATAAGTTTCATTTTGGCAGGGAAGGACACGACGTCGGCGGCGCTGACGTGGTTTTTCTGGCTGCTAGCTAAGAATCCGCGCGTGGAGAGGGAGCTTGTGAAGGAGATAATGGAGAAATCAGAGGCTTCGGTGTACGATGAAGTGAAACATATGGTTTACACGCACGCGGCGTTGTGCGAGAGCATGAGGTTGTACCCACCGGTGCCGATGGACACGAAGGAAGCAGTGGAGGACGACGTTTTGCCGGACGGGACGGTGGTGAAGAAAGGGACGATGGTGACATATCATGTTTACGCGATGGGGAGAATGGAGAGTATTTGGGGTGATGATTGGGCTGAGTTTAAGCCTGAGAGATGGTTAGAGAAGGTTGACTCTGGAAAGTGGAAGTTTGTGGGAAGAGATTCTTTCACTTATCCTGTGTTTCAGGCAGGTCCTAGGATGTGTTTGGGGAAGGAAATGGCTTTCATGCAGACGCAGAGGTTGGTGGCTGGGATTATGAGGCGCTTCAGGGTTGTTCCCGCCTTGGCGCCAGGTGTCGACCCTCACTTCATTTCCTTCTTAAGTTCCCGGATGGAAGGTGGTTTCCCCGTCAAGATCCTCCACAGGGAAACTTCACATTCAAACTAA 1554 0.4949 MFEINLDMQLLASFFVFFTLPLLFFFFFSKSPDLKKKEEAPTTITLPKVYPLIGSYLAFKDNSNRDIQWLSDLVKISPAATITLHRPLGRRQVFTGNPATVEHILKSRFSNYKKGNTFINTLSDFLGTGIFNADGDTWKFQRQVASHVFNTKSLRKFIEQVVDTELSDRLLPILASAAATQDQILDFQDILQRFALDNICKIAFGFNAEYLTPSVERSKFAVAYEEATEISSKRFREPFPLIWKVKRVLDVGSEKRLRMAVKEVHEYAKNLVREKKKELKEKASLESEDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLAKNPRVERELVKEIMEKSEASVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGTMVTYHVYAMGRMESIWGDDWAEFKPERWLEKVDSGKWKFVGRDSFTYPVFQAGPRMCLGKEMAFMQTQRLVAGIMRRFRVVPALAPGVDPHFISFLSSRMEGGFPVKILHRETSHSN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02181 517 Coils Coil 268 288 - -
Cca03g02181 517 Pfam Cytochrome P450 47 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 SUPERFAMILY Cytochrome P450 47 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PANTHER CYTOCHROME P450 14 509 - -
Cca03g02181 517 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02181 517 PANTHER CYTOCHROME P450 94A2-LIKE 14 509 - -
Cca03g02181 517 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02181 Cca-Chr3 42420547 42422452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02181 8 516 Cytochrome P450 AT5G63450 45.720 2.29e-154 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02181 K20769 K13407 gmx:100818199 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02181 03 42420547 42422452 Cca03g02181 03 42420547 42422452 ECH
Cca03g02181 03 42420547 42422452 Cca02g01052 02 27383805 27385346 PCT