Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02180 ATGATTGAGATGCTTCTGAATCTGCAGCTATTAGcttctttctttctcttattcagccttcccctcgttttcttcttcttcttcttctCCAAGTCCACAGATTTGAAAAAGAAAGAAGAAGCTCATACAACCATCACTCCCCCAAAAGTATACCCACTCATTGGCTCCTACTTAGCCTTCAAAGACAACACCAACCGCCGCATCCAGTGGCTATCCGATCTGGTCAAAATCTCACCCGCCGCCACTATCACCCTCCACCGCCCCTTGGGCAGCCGCCAAGTCGTCACCGGCAACCCCGCCACTGTAGAGCACATTCTCAAGAGCCGTTTCTCCAACTACAAAAAGGGAAACACCTTTATTAACACCCTCTCTGATTTCCTCGGCACTGGAATCTTCAACGCCGACGGCGACACGTGGAAGTTTCAGAGGCAAGTGGCCAGCCACGTGTTCAACACAAAGTCTCTTCGCAAGTTCATTGAACAAGTGGTCGACACCGAGCTCTCCGATCGTCTCCTCCCCATCCTCGCTTCAGCGGCAGCAACACAAGACCAAACCCTAGATTTCCAAGACATTCTCCAACGTTTCGCCTTCGACAACATCTGCAAAATCGCGTTCGGCTTCGACGCGGAGTACCTGACGCCGTCAGTTGAACGGAGCAAGTTCGCCGTGGCCTACGAAGAAGCCACGGAGATCAGCAGCAAACGGTTCCGCGAGCCGTTTCCGTTAATTTGGAAAGTGAAGAGGGTGCTTGACGTAGGTTCGGAAAAGCGATTGCGAATGGCAGTGAAGGAAGTGCATGAGTATGCGAAGAACTTAGTGAGAGAAAAGAAAAAGGAGCTGAAGGAGAAGGCCTCGCTTGAATCGGAGGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCCGATGAGGACTTCGTGACGGACATAGTTATAAGTTTCATTTTGGCAGGGAAGGACACGACGTCGGCGGCGCTGACGTGGTTTTTCTGGCTGCTAGCTAAGAATCCGCGCGTGGAGAGGGAGCTTGAGAAGGAGATAATGGAGAAATCAGAGGCTCCGGTGTACGATGAAGTGAAACATATGGTTTACACGCACGCGGCGTTGTGCGAGAGCATGAGGTTGTACCCACCGGTGCCGATGGACACGAAGGAAGCAGTGGAGGACGACGTTTTGCCGGATGGGACGGTGGTGAAGAAAGGGACGATGGTGACATATCATGTTTACGCGATGGGGAGAATGGAGAGCATTTGGGGTGATGATTGGGCTGAGTTTAAGCCTGAGAGATGGTTAGAGAAGGATGAAACTGGAAAGTGGAGGTTTGTCGGCAGAGATTCTTTAAATTATAATCTGTTTAAGGAAGGTCCTAGGATGTGTTTGGGGGAGGAAATGGCTTTCATGCAGATGCAGAGGTTGGTGGCTGGGATTATGAGGCGCTTCAGGGTTGTTCCCGCGTTGGCGCCGGGTGTCGACCCTCACTTCATTTCCTTCTTAAGTTCCCAGATGGAAGGTGGTTTCCCCGTCAAGATCCTCCACAGGGAAACTTCACATTCAAACTAA 1557 0.4965 MIEMLLNLQLLASFFLLFSLPLVFFFFFFSKSTDLKKKEEAHTTITPPKVYPLIGSYLAFKDNTNRRIQWLSDLVKISPAATITLHRPLGSRQVVTGNPATVEHILKSRFSNYKKGNTFINTLSDFLGTGIFNADGDTWKFQRQVASHVFNTKSLRKFIEQVVDTELSDRLLPILASAAATQDQTLDFQDILQRFAFDNICKIAFGFDAEYLTPSVERSKFAVAYEEATEISSKRFREPFPLIWKVKRVLDVGSEKRLRMAVKEVHEYAKNLVREKKKELKEKASLESEDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLAKNPRVERELEKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGTMVTYHVYAMGRMESIWGDDWAEFKPERWLEKDETGKWRFVGRDSLNYNLFKEGPRMCLGEEMAFMQMQRLVAGIMRRFRVVPALAPGVDPHFISFLSSQMEGGFPVKILHRETSHSN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02180 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PANTHER CYTOCHROME P450 94A2-LIKE 15 510 - -
Cca03g02180 518 SUPERFAMILY Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 Coils Coil 269 289 - -
Cca03g02180 518 Gene3D Cytochrome P450 27 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PANTHER CYTOCHROME P450 15 510 - -
Cca03g02180 518 Pfam Cytochrome P450 47 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca03g02180 518 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02180 Cca-Chr3 42410863 42412933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02180 8 517 Cytochrome P450 AT5G63450 44.747 3.33e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02180 K20769 K13407 gmx:100818199 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02180 03 42410863 42412933 Cca03g02180 03 42410863 42412933 ECH