Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca03g02176 | ATGGAGGAGGTTGAAGAAGCTAATAGAGCAGCTGTTGAGAGTTGTCATAGAGTTCTGAATGTGTTGTCTCGGCAAGGGGATGAAGTTCAGTATAGGAATTTAGTTGTGGAAACTGGAGAAGCTGTAGTGAGGTTCAAGAATGTTGTTTCCAAGCTAAGTAGTGGTTTGGGTCATGCAAGAGTTAGGAAGAGCAAAAAACTTAACATCCCTTTTTCTCCAAGTATCCTCTTGGACAACCTCACCTGCAAAACCGATCACCATTCAAAAAATCTGCAGTTTCCTCACAATTCAGTTCAGGAATTGGGTCCAACCGTTAGAAGTTCACTCTACGCGGGGAACCCTTCTTTGGAGCTGAGCTCCAATGAGATAAGTCCTCTTCACCTAAGCCAACAAACTTCATCCACTCACTACCACATTCTGCAGCAGCAACAACAAAGGTTATTGTTGCAGCAGCAGCAGCAACAAATGAAACATCAAGCGGAAATGATGTTTCGAAGGAACAGCAGTGTCATAAACTTGAATTTTGATAGCTCTAGCTGCACGCCATCAATGTCTTCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGGAGTGTGGCTAACATGGATGGAAGTGCCTTCCATTTACTAGGAGCTGCAAACTCTGATCAGAATTCACAACAACACAAGAGAAAGTGTTCTGCCAGAGGTGATGAGGGTAGTGTGAAGTGTGGGAGCAGTACAAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAAAGATCAATTAAGGTGCCTGCTACCAGCAACAAACTTGCAGATATCCCTCCGGATGATTATTCATGGAGGAAGTATGGGCAGAAACCAATCAAGGGATCACCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAACATGTTGAGAGGTGCTTGGAAGAGCCTTCCATGCTAATTGTTACCTATGAAGGTGACCACAACCACCCCAAGTTACCAACACAATCTGCAAATGCTTGA | 1020 | 0.4431 | MEEVEEANRAAVESCHRVLNVLSRQGDEVQYRNLVVETGEAVVRFKNVVSKLSSGLGHARVRKSKKLNIPFSPSILLDNLTCKTDHHSKNLQFPHNSVQELGPTVRSSLYAGNPSLELSSNEISPLHLSQQTSSTHYHILQQQQQRLLLQQQQQQMKHQAEMMFRRNSSVINLNFDSSSCTPSMSSTRSFISSLSIDGSVANMDGSAFHLLGAANSDQNSQQHKRKCSARGDEGSVKCGSSTRCHCSKKRKHRVKRSIKVPATSNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGDHNHPKLPTQSANA | 339 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca03g02176 | 339 | PANTHER | WRKY DNA-BINDING PROTEIN 21-RELATED | 2 | 338 | - | - | |
Cca03g02176 | 339 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 338 | IPR044810 | GO:0003700 | |
Cca03g02176 | 339 | SMART | WRKY_cls | 271 | 331 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02176 | 339 | Pfam | Plant zinc cluster domain | 224 | 269 | IPR018872 | - | |
Cca03g02176 | 339 | Gene3D | WRKY domain | 255 | 333 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02176 | 339 | SUPERFAMILY | WRKY DNA-binding domain | 269 | 331 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02176 | 339 | Pfam | WRKY DNA -binding domain | 273 | 330 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca03g02176 | 339 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca03g02176 | Cca-Chr3 | 42376917 | 42379524 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca03g02176 | 1 | 336 | WRKY Transcription Factor Family | AT2G30590 | 56.250 | 1.11e-125 | 363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca03g02176 | WRKY | 7.4e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca03g02176 | - | - | gmx:100127372 | 532.332 |