Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02173 ATGACTCTTGATGCCTCTGTGGTCGAGCTTCAAGCTTCTTCCACAAAGAAGAAAACTGCGGTTTCCAGAAGCTGGATTCTGCTGAACCATGATGGCAAAGGCACTGTGCTGGATGCGGATAAGTATGCTATCATGCGCCTCGTTAAAATTCACACAAGAGATCTTAGGATTCTCGACCCTCTCCTTTCTTATCCTTCCACCATTTTGGGCAGAGACAAAGTCATTGTTCTCAATTTAGAGCACATTAAGGCTATCATCACTGCAGATGAGGTGTTGCTGAGAGACCCAACGGATGATGACGTGGTGCCAATTGTTGAGGAACTTAAGCGACGGCTACCCAAAGTAAGTGGAGAAGAAGAGGCGTGTGCTCAAGATGGTGAAGCTGGAGAAGAAAATGAATTTCCGTTTGAGATACGGGCCTTGGAAGTTTTGTTAGAGGCAATTTGTAGTTTCCTTGACGCAAGAACAAGAGAGTTAGAGACTGCTGCTTATCCTGCTTTGGACGAACTCACCTCGAAGATCAGCAGTCGTAATTTGGATAGAGTGCGAAAATTGAAATGTGCAATGACGAGGTTGACAAATCGAGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCCGATCTTTACTTATCAAGAAAGTTGTCTGTTTCACCCTCTCCCTCAAGTAGCTCTGATGCTCCGTACTGGCTTTATGGCTCTCCAAATACAGGTTCTAAATTACACAGATCAAGCAGAGCAAGTGTAACAACAGTTCAAAGGGAGAATGATATTGAAGAGCTTGAAATGTTACTCGAGGCCAACTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAGTATATCGATGACACAGAAGATTACATAAACATACAGGTAAATTTTAGGCACAAGCAAGAATTTCTGAACAGAAATTGA 951 0.4269 MTLDASVVELQASSTKKKTAVSRSWILLNHDGKGTVLDADKYAIMRLVKIHTRDLRILDPLLSYPSTILGRDKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELKRRLPKVSGEEEACAQDGEAGEENEFPFEIRALEVLLEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTNRVQKIRDELENLLDDDDDMADLYLSRKLSVSPSPSSSSDAPYWLYGSPNTGSKLHRSSRASVTTVQRENDIEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQVNFRHKQEFLNRN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02173 316 Coils Coil 182 209 - -
Cca03g02173 316 CDD Mrs2_Mfm1p-like 25 303 IPR039204 -
Cca03g02173 316 Gene3D - 7 96 - -
Cca03g02173 316 Gene3D Magnesium transport protein CorA, transmembrane region 102 310 - -
Cca03g02173 316 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 308 IPR039204 -
Cca03g02173 316 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 8 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02173 Cca-Chr3 42342024 42345596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02173 1 314 MRS2 Gene Family AT5G09690 63.438 2.73e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02173 K16075 - gmx:100799368 507.294